Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2825 ATGTTCCTTCGAGGACTGGTCAAGATATTCCTCCTCAGTGATTCAAACCTTGGCTCAAAGTGCTACCTTGGCCGGTGTCAAGGATGTGTTGGAAACGATCGGATCAAACAGTACACGGATGATGGCATTGTTGTGTGGAGTGGCAACGATGATCAATGCCATGATGCTAGATGGGGCTATGGTGCCACCGGAGTGATATCTGTCACCAGCAACCTTGTTCCTGGTTTGATGCGAGACATCATGTTTGCAGGGAAGAATCCAACATTGAATTCAAAGCTCCTTCCTCTGATGGACTGGCTTTTCCAGGAGCCAAACCCGATTGGTTTAAACACAGCTCTTGCCCAACTTGGGGTTGTCAGACCGGTTTTCAGGCTGCCGTACGTGCCGCTCCCTGCGGAGAAAAGGATTGAGTTTGTGAACTTGGTGAAGCAAATTGGCCGAGAACATTTTGTTGGAGACAAAGATGTTCAGGTTCTTGATGATGATGATTTTATCTTAGTTGGTCGATATTAG 513 0.4717 MFLRGLVKIFLLSDSNLGSKCYLGRCQGCVGNDRIKQYTDDGIVVWSGNDDQCHDARWGYGATGVISVTSNLVPGLMRDIMFAGKNPTLNSKLLPLMDWLFQEPNPIGLNTALAQLGVVRPVFRLPYVPLPAEKRIEFVNLVKQIGREHFVGDKDVQVLDDDDFILVGRY* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2825 170 Pfam Dihydrodipicolinate synthetase family 32 144 IPR002220 GO:0016829
Amo12g2825 170 PANTHER DIHYDRODIPICOLINATE SYNTHASE 20 170 IPR002220 GO:0016829
Amo12g2825 170 SUPERFAMILY Aldolase 34 145 - -
Amo12g2825 170 PANTHER 4-HYDROXY-TETRAHYDRODIPICOLINATE SYNTHASE 1, CHLOROPLASTIC 20 170 - -
Amo12g2825 170 Gene3D Aldolase class I 24 170 IPR013785 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2825 Amo-Chr12 114596893 114597761 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2825 K01714 - gmx:100788930 257.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo04g2188 04 92739144 92742141 Amo12g2825 12 114596893 114597761 PCT
Amo12g2825 12 114596893 114597761 Amo04g2188 04 92739144 92742141 PCT