Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2822 ATGGCTTCTGCGGAAGCCGATTCCCGACTGAGTAGGATCGTCGTCCCCGCGCTCGAGGCGATCGTGAAGAACGTGTCGTGGAGGAAGCACGCAAAGCTCGCGCACGAATGCAAGTCGGTGATCGACAGGCTCAGAAATAACAATGCAGCGGAGACGGCTGCGTCGCCGTCGGGCTCTCCTTCCGACGGAGAGCCCGATTCCACGTCGCCGGGACCCCTCCACGACGGCGGTCCCGTGGAGTACTCCTTCGCGGAGTCGGAATCGATCCTCAGTCCTCTCATCAATGCCGCGAAATCCGGCGTGCTGAAGATCGCCGAGCCCGCCGTCGACGCAATCCAGAAGCTCATCGCGTACGGCTACCTCCGCGGCGAGGCGGATCCCGGAGGCTCCTCACCGGAGGCGAAATTGCTCTCGAATATGATCGAATCGGTTTGCAAGTGCAATGAGTTAGGAGACGAAACAATGGAGTTGCAGGTTCTGAAAACGCTGTTGTCCGCGGTAACCTCAATTTCGTTGCGAATTCACGGTGATTGCTTGCTTATGATAGTGCGAACCTGTTATGATTTATATCTAACGAGTAAAACTGCGGTGAATCAAACAACGGCGAAAGCCTCGTTGATTCAGATGCTGGTGATTGTGTTTAGGAGAATGGAAGCGGATTCTTCCACGGTTCCTATTCAGCCGATTGTGTTGGCTGATTTGATGGAGCCAGCAGAAAAATCTGATTCTTCCACGCAGTTTGTGCAAGGTTTTATCACCAAGATTATGCAGGACATTGATGGTGTTTTGAACCCTGGTACACCTAGTGCTAAGGTTTCGATGCTAGGTGGCCATGATGGTGCGTTTGAGACTACGGCGACGGTGGAGGGGACAAACCCGACGGATTTGTTGGATTCGACTGATAAGGACATGTTGGATGCGAAGTATTGGGAGATCAGTATGTATAAGACGGCTCTAGAAGGGAGGAAGGGAGAGCTTGTGGATGGTGGTGACATTGTGGAGAGGGATGATGATTTAGAGGTCAAGATTGGTAACAAGTTGAGGAGGGATGCCTTTTTGGTATTCAGGGCACTCTGTAAATTGTCGATGAAGACGCCCCCTAAAGAGGCTTCTTCCGATCCCCAGTTAATGAAGGGAAAGATTGTGGCTCTGGAGCTATTGAAGATTTTGCTGGAGAACGCTGGAGCTGTTTTCAGGACTAGTGAAAGGTTTCTAGGTGCCATCAAGCAGTACTTATGTTTATCATTGTTGAAGAACAGTGCTTCAACTCTTTTGATCGTTTTTCAGCTATCTTGCTCCATCTTCATCAGTCTGGTATCAAGATTTAGAGCTGGATTGAAGGCCGAAATTGGTGTTTTTTTCCCTATGATAATACTCAGGGTACTGGAAAATGTTTCTCAACCTAATTTTCAGCAAAAGATGATAGTGCTTCGGTTTCTCGAGAAACTTTGCATTGATTCACAGATATTGGTCGACATATTTATCAACTATGATTGTGATGTCAATTCATCCAACATTTTTGAGAGGATGGTCAATGGACTTCTTAAGACTGCTCAAGGTGTCCCTCCTGGTGCAGCCACCACACTTCTGCCACCTCAAGAGGCAACACTAAAACTTGAAGCCATGAAAACCTTGGTTGCTGTTTTAAAATCAATGGGAAGCTGGCTGAACAAACAATTGATAATTCCAGATCCTCATTCTGCTAAGAAAATTGAAGCAGCTGACAGCAGTGCTGAGGCTGGAGGTTTGACCATGGTAAATGGAAATGGAGAAGATCCAGTTGGACAAGACTCTCCACCTGAAATCTCAAATGATGCATCTGATGTTTCAAATATTGGGCAGCGACGGGCTTATAAACTGGAACTTCTGGAAGGTATATCACTTTTTAACAGGAAACCTAAGAAAGGAATCGAGTTCCTCATCAATGCCAAAAAAGTGGGTAATTCACCAGAGGATATAGCTGCTTTTCTTAAAGATGCATCTGGGTTGAACAAGACTTTGATTGGTGATTTTCTGGGAGAAAGGGAAGAATTATCCTTGAAGGTTATGCATGCCTATGTGGATTCATTTGACTTCCAAGGGATGGAGTTTGATGAGGCAATTAGGGTCTTTCTTCTAGGCTTTCGACTGCCTGGTGAGGCACAGAAGATTGATCGGATCATGGAAAAGTTTGCTGAACGTTATTCCAAATGTAATCCAAAGGCCTTTTCTAGTGCCGACACAGCCTATGTCCTTGCTTATTCTGTAATATTGCTCAACACAGATGCTCACAATCCTATGGTGAAGAACAAGATGTCTGTCGATGATTTCATAAGAAACAATCGTGGCATTGATGATGGAAAAGATCTCCCCGAGGAGTATTTGAGGTCCTTGTTTGAGAGAATATCCAGAACTGAGATCAAAATGAAAGATGACAATATGGTTCCACAGCAAAAACAGGCTGCAAACTCTAATAGACTTTTAGGATTGGATAGTATATTGAATATCGTGACCAACAAGCATTGGGAAGACAGCCATATGGAAACCAGTGATGATCTTATCCGTCATATGCAACAACAATTCAAAGAAAAAGCTCGCAAATCCGAGTCGGTCTATTATGCGGCAACAAATGTTGTAATCCTTAGATTCATGATTGAGGTGTGTTGGGCACCAATGTTAGCTGCCTTCAGTGTTCCTCTTGATCAAAGTGATGATGAAGTTGTAATATCTCTGTGTCTCGAGGGCTTCCGCTATGCTATTCATGTTACTTGTGGAACGTCCATGAAGACACATCGAGATGTTTTTGTGACTTCACTAGCAAAGTTTACCTCTCTGCATTCTCCTGCTGCCATTAAGCAAAAAAATGTAGATGCAATTAAGGCAATAGTTACTATTGCTGATGAGGATGGAAATTACTTACAAGAAGCTTGGGAGCATATCTTGACCTGTGTTTCCCGGTTTGAGCATCTACTTCTTCTCGGAGAGGGCGCTCCACCAGACGCTACATTCTTTTCCTTTCCTCAGAATGAGTCAGAAAAGGCAAAGCAAACGAAATCAACCATTCTTCCTGTTTTGAAAAAGAAGGGACCTGGTAGGTTACAGTATGCTGCTGCCACATTGATGCGAGGTTCATATGACAGTGCTGGAATTGGTGGCAATGCTTCTGGAACCATCACATCAGAACAGGTGAACAATATAGTTTCTAATTTGCACATGTTGGAACAAGTTGGAAGCTCTGAAATGAATCGCATATTCACTCGGAGTCAGAAGTTGAACAGTGAGGCCATAGTAGATTTTGTTAAGGCTCTGTGCAAGGTCTCCATGGACGAACTAAGATCTCCGTCTGATCCCCGAGTTTTCAGCCTCACAAAGATAGTTGAGATTGCGCACTATAATATGGACCGCATCAGGCTTGTGTGGTCGAGCATCTGGCATGTTCTCTCTGATTTCTTTGTGACTATTGGCTGTTCTGGAAACCTTTCAGTTGCAATTTTTGCGATGGATTCCTTGCGTCAGTTGTCAATGAAATTTCTAGAGCGGGAAGAGTTGGCTAATTACAATTTTCAAAATGAATTTATGAAGCCTTTTGAAATTGTCATGCAAAAGAGTAGTGCTGTGGAGATCAGAGAACTAATTATCCGATGTGTCTCTCAGATGGTTTTATCTCGTGTCAAAAATGTCAAATCTGGATGGAAGAGCATGTTCACGGTATTCACTACAGCAGCATATGATGACCATAAGAACATTGTATTCTTGGCTTTTGAAATTATTGAGAAGATTATTCGAGATTATTTTCCATACATTACTGAGACAGAGACCACCACATTCACTGACTGTGTGAATTGTCTAATTGCTTTTACAAATACTAGATTCAACAAAGAGATTAGCCTAAATGCCATTGCTTTTCTTCGGTTCTGCGCAACCAAACTAGCAGAAGGAGACTTTGGTTCATCGTCAAGAAATAAGGATAAGGAAGTCTCTAGAAAGGCTTCCCCGCGTTCACCTCAAACAGGAAAAGAGGGGAAACAAGACAATGGAGAGGTGACTCAAAAGGAGGATCATCTCTATTTTTGGTTTCCTCTATTGGCTGGATTATCTGAGCTTAGTTTTGATCCAAGACCTGAGATTAGGAAGAGCGCCTTAGAAATCCTATTTGAATCCTTGCGCAATCATGGTCATCTTTTTTCACTACCTTTATGGGAAAGAGTATTTGAGTCAGTCCTCTTTCCCATATTTGATTTTGTACGACATACTATAGATCCTTCTGGGAGTAGTTCCCCTGTCAATAATGAAGTAGAGATTGTTGGTGATCTTGAGCACGATGCTTGGCTTTATGAGACATGCACATTGGCCCTCCAATTGGTTGTAGATCTTTTTATCAACTTTTACAACACTGTCAATCCACTTTTAAGAAAGGTCCTGATGCTACTGGTAAGCTTTATACAGCGCCCTCATCAAAACCTTGCTGGCATCGGTATTGCTGCATTTGTACGTTTGATGAGTAATGCTGGGGAGCTATTTTCTGATGAAAAGTGGTTCGAAGTGGTTTTGTCGTTAAAAGAAGCAGCTATTGCAACTCTCCCTGACTTCTCATTCTTTGAAAATGAAGACTTTGTGAATAGAAATTATGAACATGCACCAACAGCTGAAGATGATGGAGATCTTCCTGACTCGGCGTCACCTGAAACTTTAGCAAACCTGAGGACTCGTCATCTTTTTGCGTATTTGTCTGATGCAAAAAGCCGAGCTGCTGTTGAGCTTTTGTTGATTCAGGCAGTGATGGAGATATATAACATGCATCGATTTCGCCTTTCAGCAAAACACATGCTAGTCCTGTTTGATGCATTGCATGAGGTGGCATTACATGCTCACAAGATTAACAGCGATACTACTTTACGTTCAAAGCTTCAAGAGTTTGGTTCCATGACCCAAATGCAAGACCCTCCATTATTACGACTTGAGAATGAGTCGTACCAAATATGCCTTACATTTTTACAGAACCTCATTATTGACAGGCCTTATAGTTATGAGGAGAGTGAGGTTGAATCTCATCTTGTTCGGCTATGCCAGGAGATCTTAGAGTTTTATATTGTAGTTGCAAGTTCTGGATTTACAACTCAGCCTTCTCGTGACAGACAGCCACATTGGTTAATTCCATTAGGGTCTGGGAAGCGGAGAGAACTGGCTACACGTTCACCTCTTGTCGTGGCTACGCTTGAGGCTATTTGTAGTTTAGGAGATGCTTCATTTGAGAAGAACCTCTCTAATTTTTTCCCTCTCCTTTCAAGCTTGGCAAGTTGCGAACATGGTACGCACGAAGTCCAGGTTGCTCTCTGTGATATGCTCAGTTTATCAGTTGGTCCTGTTCTGCTGAAGTCATGTTGA 5364 0.4355 MASAEADSRLSRIVVPALEAIVKNVSWRKHAKLAHECKSVIDRLRNNNAAETAASPSGSPSDGEPDSTSPGPLHDGGPVEYSFAESESILSPLINAAKSGVLKIAEPAVDAIQKLIAYGYLRGEADPGGSSPEAKLLSNMIESVCKCNELGDETMELQVLKTLLSAVTSISLRIHGDCLLMIVRTCYDLYLTSKTAVNQTTAKASLIQMLVIVFRRMEADSSTVPIQPIVLADLMEPAEKSDSSTQFVQGFITKIMQDIDGVLNPGTPSAKVSMLGGHDGAFETTATVEGTNPTDLLDSTDKDMLDAKYWEISMYKTALEGRKGELVDGGDIVERDDDLEVKIGNKLRRDAFLVFRALCKLSMKTPPKEASSDPQLMKGKIVALELLKILLENAGAVFRTSERFLGAIKQYLCLSLLKNSASTLLIVFQLSCSIFISLVSRFRAGLKAEIGVFFPMIILRVLENVSQPNFQQKMIVLRFLEKLCIDSQILVDIFINYDCDVNSSNIFERMVNGLLKTAQGVPPGAATTLLPPQEATLKLEAMKTLVAVLKSMGSWLNKQLIIPDPHSAKKIEAADSSAEAGGLTMVNGNGEDPVGQDSPPEISNDASDVSNIGQRRAYKLELLEGISLFNRKPKKGIEFLINAKKVGNSPEDIAAFLKDASGLNKTLIGDFLGEREELSLKVMHAYVDSFDFQGMEFDEAIRVFLLGFRLPGEAQKIDRIMEKFAERYSKCNPKAFSSADTAYVLAYSVILLNTDAHNPMVKNKMSVDDFIRNNRGIDDGKDLPEEYLRSLFERISRTEIKMKDDNMVPQQKQAANSNRLLGLDSILNIVTNKHWEDSHMETSDDLIRHMQQQFKEKARKSESVYYAATNVVILRFMIEVCWAPMLAAFSVPLDQSDDEVVISLCLEGFRYAIHVTCGTSMKTHRDVFVTSLAKFTSLHSPAAIKQKNVDAIKAIVTIADEDGNYLQEAWEHILTCVSRFEHLLLLGEGAPPDATFFSFPQNESEKAKQTKSTILPVLKKKGPGRLQYAAATLMRGSYDSAGIGGNASGTITSEQVNNIVSNLHMLEQVGSSEMNRIFTRSQKLNSEAIVDFVKALCKVSMDELRSPSDPRVFSLTKIVEIAHYNMDRIRLVWSSIWHVLSDFFVTIGCSGNLSVAIFAMDSLRQLSMKFLEREELANYNFQNEFMKPFEIVMQKSSAVEIRELIIRCVSQMVLSRVKNVKSGWKSMFTVFTTAAYDDHKNIVFLAFEIIEKIIRDYFPYITETETTTFTDCVNCLIAFTNTRFNKEISLNAIAFLRFCATKLAEGDFGSSSRNKDKEVSRKASPRSPQTGKEGKQDNGEVTQKEDHLYFWFPLLAGLSELSFDPRPEIRKSALEILFESLRNHGHLFSLPLWERVFESVLFPIFDFVRHTIDPSGSSSPVNNEVEIVGDLEHDAWLYETCTLALQLVVDLFINFYNTVNPLLRKVLMLLVSFIQRPHQNLAGIGIAAFVRLMSNAGELFSDEKWFEVVLSLKEAAIATLPDFSFFENEDFVNRNYEHAPTAEDDGDLPDSASPETLANLRTRHLFAYLSDAKSRAAVELLLIQAVMEIYNMHRFRLSAKHMLVLFDALHEVALHAHKINSDTTLRSKLQEFGSMTQMQDPPLLRLENESYQICLTFLQNLIIDRPYSYEESEVESHLVRLCQEILEFYIVVASSGFTTQPSRDRQPHWLIPLGSGKRRELATRSPLVVATLEAICSLGDASFEKNLSNFFPLLSSLASCEHGTHEVQVALCDMLSLSVGPVLLKSC* 1788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2822 1787 Pfam Domain of unknown function (DUF1981) 1169 1251 IPR015403 -
Amo12g2822 1787 Gene3D - 611 692 - -
Amo12g2822 1787 MobiDBLite consensus disorder prediction 581 608 - -
Amo12g2822 1787 Pfam C-terminal region of Mon2 protein 1349 1426 IPR032817 -
Amo12g2822 1787 MobiDBLite consensus disorder prediction 1309 1323 - -
Amo12g2822 1787 CDD Sec7 618 800 IPR000904 GO:0005085|GO:0032012
Amo12g2822 1787 Pfam Sec7 domain 620 800 IPR000904 GO:0005085|GO:0032012
Amo12g2822 1787 Pfam BIG2 C-terminal domain 1578 1775 IPR046455 -
Amo12g2822 1787 ProSiteProfiles SEC7 domain profile. 611 798 IPR000904 GO:0005085|GO:0032012
Amo12g2822 1787 SUPERFAMILY ARM repeat 407 1503 IPR016024 -
Amo12g2822 1787 SUPERFAMILY Sec7 domain 615 805 IPR035999 GO:0005085|GO:0032012
Amo12g2822 1787 MobiDBLite consensus disorder prediction 1307 1341 - -
Amo12g2822 1787 Pfam Dimerisation and cyclophilin-binding domain of Mon2 6 220 IPR032629 -
Amo12g2822 1787 MobiDBLite consensus disorder prediction 51 66 - -
Amo12g2822 1787 SMART sec7_5 615 800 IPR000904 GO:0005085|GO:0032012
Amo12g2822 1787 Gene3D - 693 812 IPR023394 -
Amo12g2822 1787 Pfam Guanine nucleotide exchange factor in Golgi transport N-terminal 348 506 IPR032691 -
Amo12g2822 1787 MobiDBLite consensus disorder prediction 51 78 - -
Amo12g2822 1787 PANTHER GUANYL-NUCLEOTIDE EXCHANGE FACTOR 9 1780 - -
Amo12g2822 1787 PANTHER SEC7 DOMAIN-CONTAINING PROTEIN-RELATED 9 1780 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2822 Amo-Chr12 114446369 114456529 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2822 K18442 - gmx:100798955 2973.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo04g2183 04 92641528 92650811 Amo12g2822 12 114446369 114456529 PCT
Amo12g2822 12 114446369 114456529 Amo04g2183 04 92641528 92650811 PCT