Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g2183 ATGGCTTCTTCGGAAGCCGATTCCCGGCTGGTCCAGGTCATCATCCCGGCGCTYGAGAAGATCATCAAGAACGCATCGTGGCGGAAGCACGCCAAGCTCGCTCACGAGTGCAAGTCCGTCATCGAAACCCTAACMTCACCGCAATCACAGCAGCAGCAGAGCAATCCTCAGTYGCCGGGGTCCGAAGACGGCGCCGCCGATCCCGAAGCCTCAGTCCCCGGTCCGCTCAACGGCGGCGGCGCCATCGAGTACTCCCTCGCGGAGTCCGAATCAATCCTCCGGCCTCTCATCAACGCCGCCAACTCCGGCGTCCTGAAGATAGCTGAGCCAGCCGTTGATGCTCTTCAGAAGCTCATCGCCCATGGTTACCTCCGCGGCGAGGCTGACCCCGCCGGTGGCTGCCCTGAGGCGAAGCTTCTCGCGAATCTTATCGAATCCGTCTGCAAGTGCCACGATCTCGGCGATGATGCCGTCGAATTGCTGGTTCTGAAGTCTCTTTTATCTGCAGTAACCTCAATTTCACTGAGAATCCACGGTGATTGCTTGCTTTTGATTGTGAGAACTTGTTATGATATATACCTTGGTAGCAAGAATGTGGTGAATCAAACAACGGCGAAGGCTTCGTTGATTCAGATGCTTGTGATTGTTTTTAGGAGAATGGAGGCGGATTCCTCCACAGTTCCGGTTCAGCCGATTGTTGTGGCTGAACTGATGGCGCCYGTGGAGAAATCTGATGCAGATAACTCGATTACACAGTCTGTGCAGGGTTTTATAACGAAGGTTATGCAGGACATTGATGGGGTTTTGAACCCTGCTACGCCGAGTAGCAGGGTTTCCGCATTGGGAGGCCACGATGGTGCATTTGAGACCACTACCACTGCCACTGTGGAGACCACGAATCCGGCGGATTTGTTGGATTCCAGTGACAAGGACATGCTGGATGCGAAGTATTGGGAGATCAGTATGTACAAGACTGCATTGGAAGGGAGGAAAGGRGAGCTTGTGGATGGCGAGGTGGTGGAGAGGGATGATGATATGGAGATCCAGATTGGGAATAAGCTGAGGAGGGATGCATTTTTGGTGTTCAGGGCACTTTGTAAGTTATCTATGAAGACACCCCCTAAGGAGGCGTCCGCAGATCCGCAGCTGATGAAGGGGAAGATTGTGGCCCTAGAGCTGTTGAAGATCTTGCTGGAGAATGCTGGAGCTGTCTTCAGGACTAGCGACAGGTTTTTGGATGCCATTAAGCAGTACTTATGCTTATCATTGTTGAAGAACAGTGCATCAAATCTTATGATTGTTTTTCAACTATCATGCTCCATATTCATCAGTCTGGTTGCTAGATTTAGAGCTGGATTGAAGGCAGAAATTGGTGTTTTTTTCCCTATGATTGTCCTCAGAGTTCTAGAAAATGTTGCTCAACCTAATTTTCAGCAAAAAATGATAGTCCTCCGTTTTCTGGAGAAGCTTTGTGATGATTCACAGATATTGGTGGACATTTTTATCAACTATGACTGCGATGTCAATTCGTCAAACATATTTGAGAGGATGGTCAATGGACTTCTTAAAACTGCCCAAGGAATCCCTCCTGGTGTAACCACCACGGTTTTGCCACCTCAAGAGGAAACATTAAAGCTTGAAGCATTGAAATGCTTGGTTGCTGTATTAAAATCTATGGGAGATTGGATGAACAAACAGTTGCGCATTCCAGAACCTCTTTCATCAAAGAAAGTGGAAGCAGTTGATAATGGGCATGAGGCTGGAGGTCATCCTATGGTAAATGGGAATGGAGAAGAGTCAGCTGAAGGATCAGAAACTCATTCTGAGATCTCCAATGATGCATCTGATGTTTCCACCATTGAGCAACGCCGGGCATATAAATTGGAACTCCAGGAAGGTATATCATTGTTTAATAGGAAGCCTAAGAAAGGAATTGAATTCCTCATYAATGCCAACAAAGTGGGTAACTCTCCGGAAGATATAGCTGCTTTTCTTAAAGATGCTTCTGGGTTGAACAAGACTCTGATTGGTGATTATCTGGGAGAAAGGGATGAAATGTCCTTGAAAGTAATGCATGCCTATGTGGATTCTTTTGACTTTCAAGGGATGCAATTTGATGAGGCAATCAGGGTTCTCCTTCAGGGATTTAGACTGCCTGGTGAGGCCCAAAAAATTGATCGAATCATGGAGAAGTTTGCCGAACGTTATTGCAAATGTAATCCAAAAGTTTTTTCCAGTGCTGATACAGCTTATGTCCTTGCTTATTCTGTGATCATGCTCAATACTGATGCTCACAATCCAATGGTGAAGAACAAGATGTCTGCTGATGATTTCATTAAAAACAATCGTGGAATAGATGATGGAAAAGATGTGCCAGAGGAATACTTGAGGTCCTTGTACGAGAGAATATCTAAAAATGAGATCAAAATGAAAGATGTTGATTTGGAAACCCAACAAAGACAAGCTGTGAATCCTAATAGACTGTTGGGTTTGGATAGTATTTTGAACATTGTGATCCGTAAGCGTGGGGAAGACAGTACTATGGGGACTAGTGATGATTTAATCCGACGTATGCAAGAACAATTCAAAGAAAAAGCTCGCAAGACAGAGTCAGTCTATTATGCTGCCACGGATGTCGTAATTCTTAGATTCATGATTGAAGCCTGCTGGGCTCCGATGTTAGCTGCCTTCAGTGTTCCTCTTGATCAAAGTGATGAYGAAGTTGTAATATCTCTCTGTCTTGAAGGCTTCCGCTATGCTATTCATGTTACTTCTGTAATGTCCATGAAGACTCATAGAGATGCTTTTGTAACCTCATTGGCAAAGTTTACTTCCCTGCATTCTCCTGCTGATATTAAGCAGAAAAATGTAGACGCAATCAAGGTCATAGTTACTATTGCTGACGAGGATGGGAATTACTTACAAGAAGCATGGGAGCATATTTTGACCTGTGTTTCCCGATTTGAGCATCTACATCTTCTTGGAGAGGGCGCTCCTCCAGATGCGACATTCTTTGCTTTTCCTCAGAATGATTCTGAAAAAACAAAGCAAGCAAAATCAACTATTCTTCCTGTCTTGAAGAAGAAGGGACCTGGGAGAATGCAGTATGCAGCTTCCACGGTAATGAGGGGTTCATATGATAGTTCTGGAATTGGCAGTAATGCTTCTGGAGCTGTCACGTCGGAACAGGTGAACAGTCTAGTTTCTAATTTGAATATGTTGGAACAAGTTGGAAGCTCGGAAATGAACCGCATATTTACTCGGAGTCAGAAGTTGAACAGTGAGGCCATAATAGATTTTGTTAAGGCTCTATGCAAGGTCTCCATGGAGGAATTGAGATCTCCCACTGATCCACGGGTGTTCAGTCTTACAAAAATAGTTGAGATTGCGCATTATAATATGAACCGCATCAGGCTTGTGTGGTCAAGTATTTGGCATGTTCTCTCAGATTTCTTTGTAACCATTGGCTGTTCCGGAAACCTTTCAATTGCAATTTTTGCAATGGATTCCTTGCGTCAGTTGTCAATGAAATTTCTAGAGCGGGAAGAGTTGGCTAACTATAATTTTCAGAATGAATTTATGAAGCCTTTTGTCATTGTTATGCGAAGGAGTAGTGCTGTTGAAATTAGAGAACTTATCATCAGATGTGTCTCTCAAATGGTTCTATCTCGTGTGAACAATGTCAAATCAGGATGGAAGAGCATGTTCATGGTATTCACAACAGCGGCATATGATGACCACAGAAATATTGTACTCTTGGCTTTTGAAATTATTGAGAAGATTATTCGTGATTACTTCCCCTACATCACCGAGACAGAAACCACCACCTTTACAGATTGTGTGAATTGTCTGATTGCATTCACCAATAGTAGATTTAACAAAGAGATTAGCTTAAATGCCATTGCTTTTCTTCGAGTCTGTGCAACTAAACTAGCAGAAGGAGACCTTGGTTTTTCATCAAGGAATAAGGACAAGGAAACTTCTGGAAAGATTTTGTCACCATCACCTCGAACAGGAAAAGAGGGAAAACTTGAAAATGGAGATTTAACAGACAAGGAAGATCATCTCTATTTCTGGTTTCCTTTATTGGCCGGTTTGTCTGAGCTTAGCTTTGATCCAAGGCCCGAGATTAGGCAGAGTGCCTTGCAAGTCCTATTTGAAACCTTACGCAATCATGGCCACCTCTTTTCATTACCTTTATGGGAAAGAGTATTTGAATCAGTCCTATTCCCAATATTTGATTATGTACGTCATGCTATTGATCCYGCAGGAAGTAGCTCACAGATCAATGAATTGGAGATTGAYGGTGAGCTTGATCAAGATGCATGGCTTTATGAAACATGCACACTAGCCCTCCAATTGGTGGTAGATCTTTTTGTCAACTTCTACAGCACTGTCAATCCTCTTTTAAGAAAGGTGCTGATACTCCTTGTTAGCTTTATAAAGCGCCCACATCAAAGCCTTGCTGGCATTGGTATTGCTGCATTTGTTCGTTTGATGAGTAATGCTGGAGAGCTATTTTCAGATGAGAAGTGGTTAGAAGTGGTTTTGTCACTAAAAGAGGCTGCAAATGCAACACTACCTAACTTTTCATTCCTTGACAGTGGAGACTCCGTGATTATAAATGATCAGCGTGCTTCAACAGCTGAAGAAGATAATGATCCTGCTGATGAGTCTAGCTCACCCAATAATTTAGAAAGCTTTAGAACTCGTCGTCTTCATGCATATTTATCTGATGCAAAATGCCGAGCTGCTGTTCAGCTTTTATTGATTCAGGCGGTGATGGAGATATACAACATGTACCGTCCTCAACTTTCAGCAAAATCAATTCTTGTCCTGTTTGATGCTTTGCATGATGTGGCATCACATGCACACAAGATTAACAGCAATATTATTTTGCGCTCAAAGTTGCAAGAGTTTGGTTCAATGACCCAAATGCAAGACCCTCCGCTGTTACGCCTTGAGAATGAGTCCTACCAAATATGCCTCACATTTTTACAGAACCTACTTGTTGACAGGCCTAATGAGGCCGCTGAGGTGGAGACTCATTTGGTCCGGCTTTGTCAGGAGGTCTTGGAGTTCTACATTAAAGTTGCAGGTTCTGGACAAGTATCTGAATCTTCTCGTGGTGCACAACAACATTGGTTAATTCCTTTAGGCTCTGGTAAGCGAAGAGAACTAGCTACACGCGCACCTCTCATTGTGGCTGCTATCCAGGCTATTTGTAATTTGGGAGATGTGTGCTTTGAGAAGAATCTGGCTCAGTTTTTTCCCCTTTTCTCAAGCTTGATAAGTTGCGAACATGGGTCAACTGAGGTCCAGGTAGCACTCAGCGACATGCTTAGTTTATCAGTTGGYCCTGTTTTGCTACGGTCATGTTGA 5382 0.437 MASSEADSRLVQVIIPALEKIIKNASWRKHAKLAHECKSVIETLTSPQSQQQQSNPQXPGSEDGAADPEASVPGPLNGGGAIEYSLAESESILRPLINAANSGVLKIAEPAVDALQKLIAHGYLRGEADPAGGCPEAKLLANLIESVCKCHDLGDDAVELLVLKSLLSAVTSISLRIHGDCLLLIVRTCYDIYLGSKNVVNQTTAKASLIQMLVIVFRRMEADSSTVPVQPIVVAELMAPVEKSDADNSITQSVQGFITKVMQDIDGVLNPATPSSRVSALGGHDGAFETTTTATVETTNPADLLDSSDKDMLDAKYWEISMYKTALEGRKGELVDGEVVERDDDMEIQIGNKLRRDAFLVFRALCKLSMKTPPKEASADPQLMKGKIVALELLKILLENAGAVFRTSDRFLDAIKQYLCLSLLKNSASNLMIVFQLSCSIFISLVARFRAGLKAEIGVFFPMIVLRVLENVAQPNFQQKMIVLRFLEKLCDDSQILVDIFINYDCDVNSSNIFERMVNGLLKTAQGIPPGVTTTVLPPQEETLKLEALKCLVAVLKSMGDWMNKQLRIPEPLSSKKVEAVDNGHEAGGHPMVNGNGEESAEGSETHSEISNDASDVSTIEQRRAYKLELQEGISLFNRKPKKGIEFLINANKVGNSPEDIAAFLKDASGLNKTLIGDYLGERDEMSLKVMHAYVDSFDFQGMQFDEAIRVLLQGFRLPGEAQKIDRIMEKFAERYCKCNPKVFSSADTAYVLAYSVIMLNTDAHNPMVKNKMSADDFIKNNRGIDDGKDVPEEYLRSLYERISKNEIKMKDVDLETQQRQAVNPNRLLGLDSILNIVIRKRGEDSTMGTSDDLIRRMQEQFKEKARKTESVYYAATDVVILRFMIEACWAPMLAAFSVPLDQSDDEVVISLCLEGFRYAIHVTSVMSMKTHRDAFVTSLAKFTSLHSPADIKQKNVDAIKVIVTIADEDGNYLQEAWEHILTCVSRFEHLHLLGEGAPPDATFFAFPQNDSEKTKQAKSTILPVLKKKGPGRMQYAASTVMRGSYDSSGIGSNASGAVTSEQVNSLVSNLNMLEQVGSSEMNRIFTRSQKLNSEAIIDFVKALCKVSMEELRSPTDPRVFSLTKIVEIAHYNMNRIRLVWSSIWHVLSDFFVTIGCSGNLSIAIFAMDSLRQLSMKFLEREELANYNFQNEFMKPFVIVMRRSSAVEIRELIIRCVSQMVLSRVNNVKSGWKSMFMVFTTAAYDDHRNIVLLAFEIIEKIIRDYFPYITETETTTFTDCVNCLIAFTNSRFNKEISLNAIAFLRVCATKLAEGDLGFSSRNKDKETSGKILSPSPRTGKEGKLENGDLTDKEDHLYFWFPLLAGLSELSFDPRPEIRQSALQVLFETLRNHGHLFSLPLWERVFESVLFPIFDYVRHAIDPAGSSSQINELEIDGELDQDAWLYETCTLALQLVVDLFVNFYSTVNPLLRKVLILLVSFIKRPHQSLAGIGIAAFVRLMSNAGELFSDEKWLEVVLSLKEAANATLPNFSFLDSGDSVIINDQRASTAEEDNDPADESSSPNNLESFRTRRLHAYLSDAKCRAAVQLLLIQAVMEIYNMYRPQLSAKSILVLFDALHDVASHAHKINSNIILRSKLQEFGSMTQMQDPPLLRLENESYQICLTFLQNLLVDRPNEAAEVETHLVRLCQEVLEFYIKVAGSGQVSESSRGAQQHWLIPLGSGKRRELATRAPLIVAAIQAICNLGDVCFEKNLAQFFPLFSSLISCEHGSTEVQVALSDMLSLSVGPVLLRSC* 1794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g2183 1793 MobiDBLite consensus disorder prediction 1325 1347 - -
Amo04g2183 1793 Pfam Sec7 domain 627 808 IPR000904 GO:0005085|GO:0032012
Amo04g2183 1793 MobiDBLite consensus disorder prediction 580 616 - -
Amo04g2183 1793 Pfam Domain of unknown function (DUF1981) 1177 1259 IPR015403 -
Amo04g2183 1793 SMART sec7_5 623 808 IPR000904 GO:0005085|GO:0032012
Amo04g2183 1793 MobiDBLite consensus disorder prediction 42 60 - -
Amo04g2183 1793 SUPERFAMILY Sec7 domain 623 815 IPR035999 GO:0005085|GO:0032012
Amo04g2183 1793 MobiDBLite consensus disorder prediction 42 77 - -
Amo04g2183 1793 PANTHER GUANYL-NUCLEOTIDE EXCHANGE FACTOR 10 1786 - -
Amo04g2183 1793 CDD Sec7 626 808 IPR000904 GO:0005085|GO:0032012
Amo04g2183 1793 PANTHER SEC7 DOMAIN-CONTAINING PROTEIN-RELATED 10 1786 - -
Amo04g2183 1793 Pfam Guanine nucleotide exchange factor in Golgi transport N-terminal 355 513 IPR032691 -
Amo04g2183 1793 Gene3D - 701 820 IPR023394 -
Amo04g2183 1793 Pfam BIG2 C-terminal domain 1586 1782 IPR046455 -
Amo04g2183 1793 SUPERFAMILY ARM repeat 391 1412 IPR016024 -
Amo04g2183 1793 Gene3D - 619 700 - -
Amo04g2183 1793 ProSiteProfiles SEC7 domain profile. 619 806 IPR000904 GO:0005085|GO:0032012
Amo04g2183 1793 Pfam Dimerisation and cyclophilin-binding domain of Mon2 6 223 IPR032629 -
Amo04g2183 1793 Pfam C-terminal region of Mon2 protein 1358 1421 IPR032817 -
Amo04g2183 1793 MobiDBLite consensus disorder prediction 1544 1564 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g2183 Amo-Chr4 92641528 92650811 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g2183 K18442 - gmx:100789988 3113.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo04g2183 04 92641528 92650811 Amo12g2822 12 114446369 114456529 PCT
Amo12g2822 12 114446369 114456529 Amo04g2183 04 92641528 92650811 PCT