Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2578 ATGAAGTTTGGTAAGAGGTTGAAGCAACAGATTCAAGATTCCCTCCCCGAATGGAGGGACAAGTTCTTGTCGTACAAGGAACTGAAGAAGCTTGTGAAGCTCATTTCGGCCGCGCCAACGCGCCGAAATGAGTCTTTGGAGTATGGCAAGGCTGAGTCTGATTTCGTGTACTTGTTGGACATTGAGATTGACAAGTTCAATGGCTTCTTCATGGAGCAAGAAGAAGAGTTTGTTATTCGCCATGAGAACTTAAAACAGAAGATAAAGAGAGTGGTTGATTTATGGGGACCAAATGGCATTCACCCTTCAGAAGAGAATTACAAGGAGGAGATGGAAAAAATCAGAAAAGCAATTGTTGATTTCCATGGTGAAATGGTTCTCTTGGTAAACTACAGCAACATCAATTACACAGGGCTGGCTAAGATTCTGAAAAAATATGACAAGAGAACAGGAGGACTATTGCGTTTGCCATTCATTCAGAAAGTTTTGGTGCAACCCTTTTTCACAACTGATATAATCTCAAACCTAGTGAAGGAATGTGAGAGCATAATTGACACAGTATTCCCAGCAGAGGAAGCAGCTGAAAGAGCAAAAGAAGCCATTGTTGTGGCAGGGGAAGGTATTTTCAGGAACACTGTTAAGGCTTTGCTTACAATGCAAGAAATAAGAAAAGGGAGTTCAACTGAGAGTCCTTTTTCTTTGCCTCCTCTTAATTTGCCGGATTCTGATCTCATCCAATCAATACAACTCAATGCTGCAGTTCCAATTGTGTAG 774 0.4147 MKFGKRLKQQIQDSLPEWRDKFLSYKELKKLVKLISAAPTRRNESLEYGKAESDFVYLLDIEIDKFNGFFMEQEEEFVIRHENLKQKIKRVVDLWGPNGIHPSEENYKEEMEKIRKAIVDFHGEMVLLVNYSNINYTGLAKILKKYDKRTGGLLRLPFIQKVLVQPFFTTDIISNLVKECESIIDTVFPAEEAAERAKEAIVVAGEGIFRNTVKALLTMQEIRKGSSTESPFSLPPLNLPDSDLIQSIQLNAAVPIV* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2578 257 PANTHER SPX DOMAIN-CONTAINING PROTEIN 3 1 255 IPR031142 GO:0016036
Amo12g2578 257 PANTHER SPX DOMAIN-CONTAINING PROTEIN 3 1 255 - -
Amo12g2578 257 Pfam SPX domain 1 39 IPR004331 -
Amo12g2578 257 Pfam SPX domain 102 161 IPR004331 -
Amo12g2578 257 ProSiteProfiles SPX domain profile. 1 160 IPR004331 -
Amo12g2578 257 CDD SPX_AtSPX1_like 2 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2578 Amo-Chr12 109848128 109851976 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2578 - - adu:107475702 480.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g2578 12 109848128 109851976 Amo12g2578 12 109848128 109851976 ECH
Amo12g2578 12 109848128 109851976 Amo02g2707 02 84011608 84015644 hybridization