Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g2707 ATGAAATTTGGTAAGAGGTTGAAGCAACAGATTCAAGATTCCCTCCCCGAATGGAGGGACAAGTTCTTGTCGTACAAGGAACTGAAGAAGCTTGTGAAGCTCATTTTGGCCGCGCCAACGCGGCGAAATGAGTCTTGGCGTGGCCGAAATGAGTCTTTGGAGTATGGCAAGGCTGAGTCTGATTTTGTGTACTTGTTGGATATTGAGATTGACAAGTTCAATGGCTTCTTCATGGAGCAAGAAGAAGAGTTTGTTATTCGCCATGAGAACTTAAAACAGAAGATAAAGAGAGTGGTTGATTTATGGGGACCAAATGGCATTCACCCTTCAGAAGAGAATTACAAGGAGGAGATGGAAAAAATCAGAAAAGCAATTGTTGATTTCCATGGTGAAATGGTTCTCTTGGTAAACTACAGCAACATCAATTACACAGGGCTGGCTAAGATTCTGAAAAAATATGACAAGAGAACAGGAGGACTATTGCGTTTGCCATTCATTCAGAAAGTTTTGGTGCAACCCTTTTTCACAACTGATATAATCTCAAACCTAGTGAAGGAATGTGAGAGCATAATTGACACAGTGTTCCCAGCAGAGGAAGCAGCTGATAGAGCAAAAGAAGCCATTGTTGTGGCAGGGGAAGGTATTTTCAGGAACACTGTTAAGGCTTTGCTTACAATGCAAGAAATAAGAAAAGGGAGTTCCACTCAGAGTCCTTTTTCTTTGCCTCCTCTTAATTTGCCGGATTCTGATCTCATCCAATCAATACAACTCAATGCTGCAGTTCCAATTGTGTAG 795 0.4164 MKFGKRLKQQIQDSLPEWRDKFLSYKELKKLVKLILAAPTRRNESWRGRNESLEYGKAESDFVYLLDIEIDKFNGFFMEQEEEFVIRHENLKQKIKRVVDLWGPNGIHPSEENYKEEMEKIRKAIVDFHGEMVLLVNYSNINYTGLAKILKKYDKRTGGLLRLPFIQKVLVQPFFTTDIISNLVKECESIIDTVFPAEEAADRAKEAIVVAGEGIFRNTVKALLTMQEIRKGSSTQSPFSLPPLNLPDSDLIQSIQLNAAVPIV* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g2707 264 CDD SPX_AtSPX1_like 2 156 - -
Amo02g2707 264 PANTHER SPX DOMAIN-CONTAINING PROTEIN 3 1 262 IPR031142 GO:0016036
Amo02g2707 264 Pfam SPX domain 1 38 IPR004331 -
Amo02g2707 264 Pfam SPX domain 109 168 IPR004331 -
Amo02g2707 264 PANTHER SPX DOMAIN-CONTAINING PROTEIN 3 1 262 - -
Amo02g2707 264 ProSiteProfiles SPX domain profile. 1 167 IPR004331 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g2707 Amo-Chr2 84011608 84015644 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g2707 - - adu:107475702 511.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g2578 12 109848128 109851976 Amo02g2707 02 84011608 84015644 hybridization