Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2577 ATGTCAATCATAAACACTCATGCTGCACTTGTTTGTCCACCAGGCTTGGGTCACATCATCCCTTTTCTTGAACTTGCCAAAAAACTWGTGTCACACAAGAAAATTACCAAACTTACTATGTTCCTATCTTCAACCAAGAACAACTCTTGTAAGCCTCAAATAGCAACAAATATTATTCAATCATTAATGAAGCCTGACCTCTTTAACATCATTCATGTCATTCATCTCCCACCTATTGATGTTCCTACTAATACAAACACAGGAACAAAGCTAGCAATCATAATGAGAGAATTAATCCCACATCTTTGTCATGAAATCTCCACTATGACATCACCAAAACCAACAATGCTCATCACAGAGCTATTTGGATCACTAGTGATGCCTATTGCTGAAAAATTCAACATGTCAAAGTTTGTTTTTTTTAGTTTTAGTGCATGGAATGTTGCACTTGCACTTCACACCCCAACATTAGATGAAGTAGTGGAAGGTGAGTACACAGATCAAAAGGAGTGTATCCAAATTCCTGGTTGCAACCCCATAAGACCTTGTGATTTGTTCACACCAATGCTTGATAGGAATGATCAATTGTATCATGAATATCTCCAAATTTGTGAGCAAATAAGAAAGGTTGATGGGATTTTTGTGAACACTTTTGATGAGCTAGAGGCTAAGACAATTGTAGCACTAAGAAGTGGAAAAATATCTAAGATACCAGTTTATCCAATTGGGCCATTGATTAGGGAAGCTAAGAAGCAAAATTGTGATGATGAAAATAGAAATTATGTTATTGATTGGTTAGACAAGCAAGAAGAAGAGTCAGTGATATATGTATCATTTGGTAGTGGATATACAATATCACATGAACAAGTCAAAGAGATGGCTTTGGGGTTGGAGCTAAGTGGGAAGAAATTTGTTTGGTCTTTAACACCACCGTCCACAAAAGCTGGGGATGATCATTATCTCACGGCAGGCGAGGATGTCGAATCGAATGGCGTCCCTAAATCTCAAGCATCAGTCAGTGTTTTCCCAGATGAATTCTACAGGATGGAAGGCAAGGGATTGATGGTAATGGATTGGGCACCACAACTGGAGATTTTGAAGCATTCATCAACTGGAGGGTTTTTGTCACATTGTGGATGGAACTCAATACTAGAGAGTGTGTCATGTGGGGTTCCAATTGTGGCGTGGCCTCTATTTGCAGATCAAATGATGAATGCTGAAATTATAGCTAAAGATATTGGAATTGGAGTTAGATTGAATGTGACACAATCTGCAAATGTAGTTGGAAGTGAAGAGATAGCAAAAACTATATGTAAGATAATGGATAAGGAGGACATTGAAGGTTGTGCAACGAGGAAAAGGGTTAAGGAGCTTAAGAACATAGCAGAAAAAGCTTGGTCTCAATATGGTCCTTCCTTTTGTGAAATGACAAATTCATTTGTGAAAATAAGTCAGACACATGGGATGTGA 1470 0.381 MSIINTHAALVCPPGLGHIIPFLELAKKLVSHKKITKLTMFLSSTKNNSCKPQIATNIIQSLMKPDLFNIIHVIHLPPIDVPTNTNTGTKLAIIMRELIPHLCHEISTMTSPKPTMLITELFGSLVMPIAEKFNMSKFVFFSFSAWNVALALHTPTLDEVVEGEYTDQKECIQIPGCNPIRPCDLFTPMLDRNDQLYHEYLQICEQIRKVDGIFVNTFDELEAKTIVALRSGKISKIPVYPIGPLIREAKKQNCDDENRNYVIDWLDKQEEESVIYVSFGSGYTISHEQVKEMALGLELSGKKFVWSLTPPSTKAGDDHYLTAGEDVESNGVPKSQASVSVFPDEFYRMEGKGLMVMDWAPQLEILKHSSTGGFLSHCGWNSILESVSCGVPIVAWPLFADQMMNAEIIAKDIGIGVRLNVTQSANVVGSEEIAKTICKIMDKEDIEGCATRKRVKELKNIAEKAWSQYGPSFCEMTNSFVKISQTHGM* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2577 489 Gene3D Glycogen Phosphorylase B; 7 472 - -
Amo12g2577 489 PANTHER UDP-GLYCOSYLTRANSFERASE 72E1 5 478 - -
Amo12g2577 489 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 7 474 - -
Amo12g2577 489 ProSitePatterns UDP-glycosyltransferases signature. 359 402 IPR035595 -
Amo12g2577 489 CDD GT1_Gtf-like 7 459 IPR002213 GO:0008194
Amo12g2577 489 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 264 423 IPR002213 GO:0008194
Amo12g2577 489 PANTHER GLYCOSYLTRANSFERASE 5 478 - -
Amo12g2577 489 Gene3D Glycogen Phosphorylase B; 260 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2577 Amo-Chr12 109798735 109800204 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g2577 7 473 Glycosyltransferase AT2G18570 39.293 2.10e-117 351
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2577 K12356 - aip:107628517 992.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g2577 12 109798735 109800204 Amo02g2709 02 84033547 84042677 hybridization