Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g2709 ATGTCAATCATAAACACTCATGCTGCACTTGTTTGTCCACCAGGCTTGGGTCACATCATCCCTTTTCTTGAACTTGCCAAAAAACTTGTGTCACACAAGAAAATTACCAAACTTACTATGTTCCTATCTTCAACCAAGAACAACTCTTGTAAGCCTCAAATAGCAACAAATATTATTCAATCATTAATGAAGCCTGACCTCTTTAACATCATTCATGTCATTCATCTCCCACCTATTCATGTTCCTACTAATACAAACACAGGAACAAAGCTAGCAATCATAATGAGAGAATTAATCCCACATCTTTGTCATGAAATCTCCACTATGACATCACCAAAACCAACAATGCTCATCACAGAGCTATTTGGATCACTAGTGATGCCTATTGCTGAAAAATTCAACATGTCAAAGTTTGTTTTTTTTAGTTTTAGTGCATGGAATGTTGCACTTGCACTTCACACCCCAACATTAGATGAAGTAGTGGAAGGTGAGTACACAGATCAAAAGGAGTGTATCCAAATTCCTGGTTGCAACCCCATAAGACCTTGTGATTTGTTCACACCAATGCTTGATAGGAATGATCAATTGTATCATGAATATCTCCAAATTTGTGAGCAAATAAGAAAGGTTGATGGGATTTTTGTGAACACTTTTGATGAGCTAGAGGCTAAGACAATTGTAGCACTAAGAAGTGGAAAAATATCTAAGATACCAGTTTATCCAATTGGGCCATTGATTAGGGAAGCTAAGAAGCAAAATTGTGATGATGAAAATAGAAATTATGTTATTGATTGGTTAGACAAGCAAGAAGAAGAGTCAGTGATATATGTATCATTTGGTAGTGGATATACAATATCACATGAACAAGTCAAAGAGATGGCTTTGGGGTTGGAGCTAAGTGGGAAGAAATTTGTTTGGTCTTTAACACCACCGTCCACAAAAGCTGGGGATGATCATTATCTCACGGCAGGCGAGGATGTCGAATCGAATGGCGTCCCTAAATCTCAAGCATCAGTCAGTGTTTTCCCAGATGAATTCTACAGGATGGAAGGCAAGGGATTGATGGTAATGGATTGGGCACCACAACTGGAGATTTTGAAGCATTCATCAACTGGAGGGTTTTTGTCACATTGTGGATGGAACTCAATACTAGAGAGTGTGTCATGTGGGGTTCCAATTGTGGCGTGGCCTCTATTTGCAGATCAAATGATGAATGCTGAAATTATAGCTAAAGATATTGGAATTGGAGTTAGATTGAATGTGACACAATCTGCAAATGTAGTTGGAAGTGAAGAGATAGCAAAAACTATATGTAAGATAATGGATAAGGAGGACATTGAAGGTTGTGCAACGAGGAAAAGGGTTAAGGAGCTTAAGAACATAGCAGAAAAAGCTTGGTCTCAATATGGTCCTTCCTTTTGTGAAATGACAAATTCATTTGTGAAAATAAGAATGGGTCACATAATCCCAATTCTTGAACTTGCCAAACACCTTCTCACACACCAAAAAATCACTATTACCAAAATAACCTTATTCATTCCTTCAATCAATTCATCATCATCCAAAGCTGAGAAAGATGTTCTCCAATCAACCATAAATCAAAACATTTCAATTGACATAATCCACCTTCCCCCAATTGACATATCCAACCATATTAGTAATAACGTTCTTGATCCTAATAATATTGTAACCTTAGAGACCAAGATAGCAATCACAATGCATGAAGCACCAAAACTCTTTGTAAGTGCAATTTCCAACATGAAATTCAAACCAACCATGATTATCACCGATTATTTCCTAAGCCAAACTCTTCCTCTAGTGAAGAAAATGAACAATATGGAAGTTCCTATGTACCTTTTTGCCCCAACAAGTGCATGGCTTGTTGCACTTGGTTTTCACTCACCAAAGTTAGATAAAGAGGTAGAAGAAGGAGAATATCATAGCCATGGAGAGACACCAATATTAATCCCAGGTTGCAAAGGTATACATCCTAGTGATTTGTTCCAGATGATGGAGGACAGAACACATAGGTTGTATCTTGAGTATCTTCTCATGTGTGAGGCGTTAACATTGGCTGATGGGATTTTTGTTAACACATTTGAGGAGTTAGAGCCTAAGACACTTGAAGCACTAAGAAGTGGAAAAATAACAAAGGTACCCATTTTCCCAATTGGGCCAGTGATAAGGGAAACTAATGAACAAAATAGAAACCATGTTGTTGATTGGTTAGACATTCAAGAAGAAGAGTCAGTGATATATGTTTCACTTGGAAGTGGATACTCAATGTCACATGAACAAATCAAAGAGATGGCTATCGGGTTGGAGCTAAGTGGTCAAAAATTTGTTTGGTCTTTGAGGCCACCATCCACAAAAACTGGGAATAATAACTATTATCTCACAGCAGGTGAGGATGCTGAAACAAATAAAAAATGCCACTCATCAGTGCAAGAGGCTTCAACTCAGATGGATATTGAAAAGATAAATGTAGACGACCTTATTCTTAAAAGCAAAAGTAGCAAAACAAATGGTGCTACTAAATCCCAACAACCAAGCGATTTTCCAGAAGAATTCTATAGAATACAAAGCAATGGGATTGTTGTAATGGATTGGGCACCACAATTAGAGATTTTAAATCACGCATCAATTGGAGGGTTTGTGTCACATTGTGGATGGAACTCAATCATAGAGAGTGTTTCATGTGGTGTTCCAATCATTGGTTGGCCACTATTTGCTGAGCAAAGGATGAATGCATCAATGCTACAAGATGAAGAAGTTGGCATTGCAATTAGATTGAATGTGTCAATGTCTACAAAGATTGTGGGAAGTGAAGAGATAGGAAAAGCTATAAGGAAGATAATGGATAAAGGGGATATTGAAGGGTGTGCAATTAGGAAAAGGGTCAAGGAGCTCAAACACATAGCTCAAAAAGCTTGGTCTCATCATCATGGTTCCTCTTATTTTGCACTTTCAAGAATCGTTAACTCAAATGGTGTGTCATAA 3000 0.377 MSIINTHAALVCPPGLGHIIPFLELAKKLVSHKKITKLTMFLSSTKNNSCKPQIATNIIQSLMKPDLFNIIHVIHLPPIHVPTNTNTGTKLAIIMRELIPHLCHEISTMTSPKPTMLITELFGSLVMPIAEKFNMSKFVFFSFSAWNVALALHTPTLDEVVEGEYTDQKECIQIPGCNPIRPCDLFTPMLDRNDQLYHEYLQICEQIRKVDGIFVNTFDELEAKTIVALRSGKISKIPVYPIGPLIREAKKQNCDDENRNYVIDWLDKQEEESVIYVSFGSGYTISHEQVKEMALGLELSGKKFVWSLTPPSTKAGDDHYLTAGEDVESNGVPKSQASVSVFPDEFYRMEGKGLMVMDWAPQLEILKHSSTGGFLSHCGWNSILESVSCGVPIVAWPLFADQMMNAEIIAKDIGIGVRLNVTQSANVVGSEEIAKTICKIMDKEDIEGCATRKRVKELKNIAEKAWSQYGPSFCEMTNSFVKIRMGHIIPILELAKHLLTHQKITITKITLFIPSINSSSSKAEKDVLQSTINQNISIDIIHLPPIDISNHISNNVLDPNNIVTLETKIAITMHEAPKLFVSAISNMKFKPTMIITDYFLSQTLPLVKKMNNMEVPMYLFAPTSAWLVALGFHSPKLDKEVEEGEYHSHGETPILIPGCKGIHPSDLFQMMEDRTHRLYLEYLLMCEALTLADGIFVNTFEELEPKTLEALRSGKITKVPIFPIGPVIRETNEQNRNHVVDWLDIQEEESVIYVSLGSGYSMSHEQIKEMAIGLELSGQKFVWSLRPPSTKTGNNNYYLTAGEDAETNKKCHSSVQEASTQMDIEKINVDDLILKSKSSKTNGATKSQQPSDFPEEFYRIQSNGIVVMDWAPQLEILNHASIGGFVSHCGWNSIIESVSCGVPIIGWPLFAEQRMNASMLQDEEVGIAIRLNVSMSTKIVGSEEIGKAIRKIMDKGDIEGCAIRKRVKELKHIAQKAWSHHHGSSYFALSRIVNSNGVS* 1000
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g2709 999 Gene3D Glycogen Phosphorylase B; 483 741 - -
Amo02g2709 999 ProSitePatterns UDP-glycosyltransferases signature. 870 913 IPR035595 -
Amo02g2709 999 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 862 954 IPR002213 GO:0008194
Amo02g2709 999 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 264 423 IPR002213 GO:0008194
Amo02g2709 999 Gene3D Glycogen Phosphorylase B; 742 978 - -
Amo02g2709 999 CDD GT1_Gtf-like 485 971 IPR002213 GO:0008194
Amo02g2709 999 ProSitePatterns UDP-glycosyltransferases signature. 359 402 IPR035595 -
Amo02g2709 999 Gene3D Glycogen Phosphorylase B; 260 467 - -
Amo02g2709 999 CDD GT1_Gtf-like 7 459 IPR002213 GO:0008194
Amo02g2709 999 PANTHER UDP-GLYCOSYLTRANSFERASE 72E1 485 805 - -
Amo02g2709 999 PANTHER UDP-GLYCOSYLTRANSFERASE 72E1 844 994 - -
Amo02g2709 999 PANTHER UDP-GLYCOSYLTRANSFERASE 72E1 5 478 - -
Amo02g2709 999 Gene3D Glycogen Phosphorylase B; 7 472 - -
Amo02g2709 999 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 485 993 - -
Amo02g2709 999 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 7 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g2709 Amo-Chr2 84033547 84042677 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g2709 485 989 Glycosyltransferase AT2G18570 37.182 1.76e-99 319
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g2709 K12356 - aip:107628517 1977.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g2577 12 109798735 109800204 Amo02g2709 02 84033547 84042677 hybridization