Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2571 ATGAACAAAAGAAAGAACAGATTCATACAGCTCAGCCTAAGCAGTCAAGGAGTCGGGGAACAATGGAGGCCCGCAGAAAATATTGGCACTGAAGTTGCAGCTGCTAATCAAAATGACGAAGCACAGCTGCAGAATAACCTTGGAGAGACTTCAGCAGTTTCAGCTGAAGAGCCTGAGGGAAAATTCAGGGATAACACTGCTGGACGGGGACGGGGATTGAAGCGTAAGATGAGAGGGGGACGAGGATCTAAATCAATGAGGACTGGTGATGGATCAAGAAAGCCAGTGCAACCTCAAGCAGCCGAGCAGTTTGTGCCTTTTAAATGTGAATTGTGTAATGTCAAGTGTGAGTCCGAGGTTGTTTACCAGAGTCATGTGACCGGGAAAAAGCACTTGTCGAATCTCAAGCGTGCCCATGGCCCACAAGCTTTGTCCGGAATACTAGGGCTTCAACAAGCACTTAACCCCCCTGACATCAATGCCCTCTCAAATGCAATCAATGCTCAAGTCCAACAAGGTGATAATGATCCGCAAGTCCTTTTGGCTCAGCTTCTGATGAATGTATTATCTCAAGCACAAGCACAGGCACAAGGACAAACACCAGGAACTGCACCGCAGACTGGTCCCGTGGCTGCTCAGATGCTGGGTGCAGTGCCCTCTATTGCTGGATCCAGTTATGAACCCCAGCTGTCTCAGACACAAGCCTTGGAAATTATGGCACATGTTAATGCTCCGGAGGATTCTAACATCGGTTCCCAAAATGCAGGTGGAAATCGTGAATTGAAACAGCAGCATGAGTATCCCCAGCCTAGTTTAATTGCGACTTTATCAGACAACTCAGGGGCAGCAAATGACCAAATAGCTTCAGAGTGTGAAGCTTCCACCTCACAGAACCAAGATAAATGA 906 0.4768 MNKRKNRFIQLSLSSQGVGEQWRPAENIGTEVAAANQNDEAQLQNNLGETSAVSAEEPEGKFRDNTAGRGRGLKRKMRGGRGSKSMRTGDGSRKPVQPQAAEQFVPFKCELCNVKCESEVVYQSHVTGKKHLSNLKRAHGPQALSGILGLQQALNPPDINALSNAINAQVQQGDNDPQVLLAQLLMNVLSQAQAQAQGQTPGTAPQTGPVAAQMLGAVPSIAGSSYEPQLSQTQALEIMAHVNAPEDSNIGSQNAGGNRELKQQHEYPQPSLIATLSDNSGAANDQIASECEASTSQNQDK* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2571 301 MobiDBLite consensus disorder prediction 56 71 - -
Amo12g2571 301 MobiDBLite consensus disorder prediction 246 301 - -
Amo12g2571 301 MobiDBLite consensus disorder prediction 37 98 - -
Amo12g2571 301 SMART ZnF_U1_5 104 138 IPR003604 GO:0003676|GO:0008270
Amo12g2571 301 Pfam Zinc-finger of C2H2 type 107 131 - -
Amo12g2571 301 MobiDBLite consensus disorder prediction 37 52 - -
Amo12g2571 301 PANTHER GLUTENIN, HIGH MOLECULAR WEIGHT SUBUNIT 12-LIKE 25 250 - -
Amo12g2571 301 Gene3D Classic Zinc Finger 92 138 - -
Amo12g2571 301 PANTHER OS06G0651300 PROTEIN-RELATED 25 250 - -
Amo12g2571 301 SUPERFAMILY beta-beta-alpha zinc fingers 86 138 IPR036236 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2571 - - ahf:112751837 490.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g2571 12 109594347 109599869 Amo12g2571 12 109594347 109599869 ECH
Amo12g2571 12 109594347 109599869 Amo02g2717 02 84153000 84156146 hybridization