Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g2717 ATGAATTATTCTGCCTATAACGAACCACCCCCCTATTATCCATACAGTAACCGATTCAATTACATCCGCGATCCTCATCCAACCTACCCTCCGATTCGCCATCCCGATTTGTACCTAACCGAACCTGAACCGCTTGCTCCGAGACTTATTAACCGGCCGGTTGGGCCACCTCAATATAGTCATAGACCATATGGAGTGCATGGTGGGGGGCCATTCAATACCTTTTGGAGACATGGGCCAGATGGTGGTAGACACTTCACATCTTATTCTTCTGGACCTGCCATTTCTGATGCAGCAGGTCTACATGCTGCTGCTAGAGCCACTTCTATGTTACGATCTTCATCCTCAGTTTTAGCGTCAGCACCATCAGCCCAACAAGCTCGAAGGCCATATGGAACTGCTGCTGCTGAAGCCTCTTCTGTGGTACTATCTTCATCCTCAGTTTTAGCGTCAGCACCATCAGCCCAACGAGCTCGAAGGCCATATGGAACTGCTGCTGCTGAAGCCTCTTTTGTAGAACGATCTTCATCCTCAGTTTTAGCGTCAGCACCTTTAGTGTCAGCACCATCAGCCAAACGAGCTCGAAAGCCATATGGAACTGCTGCTGCTGAAGCCTCTTTTGTAGAACGATCTTCATGCTCAGTTATAGCGTCAGCACCATCAGCTAAACAAGCTCAAAAGCCAGATGGAACTGCTGCTGCTGGGGCCTCTTCTGTTGTACGATCTTCATCCTTAGTTTTAGCGTCAGCACCATCAGCCAAACAAGCTCGAGAGCCAGATGGAACTGCTGCTGCTGCTGGTGCTGGAGCCTCTTCTGTGGTACGATCTTCATCCTCAGTTTTAGCGTCAGCACCATCAGCCAAACAAGCTCGAGAGCCAGATGGAACTGCTGGAGCCTCTTCTGTGGTACGATCTTCATCCTCAGTAACGTCAGCACCATCAGCCAAACAAGCTCAGAAGCCAGCTGCACCGTCGCAACCACCACCAAAGGCATGGTGTGAAATTTGTAAGATTTGGTGCCATACTCTAGGGGTGTTGGAAGAGCATAAACAGGGGAGGCGACACATGAATAAGGTGAAGCGACAGGAAAGATTAGAGGAACAAAAAGCAATAAGTGAGCTACAGAATAAACAGACTGCTACTACTAAATCGAATTTAACAGACCAGGCTAAGAAAGTTCAGGAGCCTGCAAAAGTTGAATGCCCCACAGGAAATACTGGATCTGAAGTTGCATCTGTTAATCACAAGGTTGAAACAATGGTGCAGAATGACGCGAGAGATACTTTTGCAGCTCCAGCTGAAGAACCTGAGGCGAAGAAAACCAGTCGGAACATCATTCCTGTACAGCACCATGTATTGAAGCCGAAGAAGAAACGAAAAGGATCTAAACTCGTTAAGATAACTGCTGCTCTAAGAAGGCCAGTGCAAAATCAAATATCTGAGCAGTTTATACCTTTTGATTGTAAATTGTGCAATGTTAGATTTGAGTCTGAGATTGCTTTTGGGAGTCATGTGAACGGGAAGGAACACATATCACGTCTAATCCATGCCCCCGGCCGGCAAGCTTTGTCCGGAATGTTTGGTCTCCAAGTACTTTACCCTCCTGACATCGATTCTCTGTCAAAAGCAATTAATGTTCAGGTCCAACATGGTGATAATAATCCACAACTCCTCTTAGCTAAGCACCTGATGGATTCATTATCTCAATCAAAAGTAGCAGCAACAGCACCACCGATGAACTGA 1743 0.4687 MNYSAYNEPPPYYPYSNRFNYIRDPHPTYPPIRHPDLYLTEPEPLAPRLINRPVGPPQYSHRPYGVHGGGPFNTFWRHGPDGGRHFTSYSSGPAISDAAGLHAAARATSMLRSSSSVLASAPSAQQARRPYGTAAAEASSVVLSSSSVLASAPSAQRARRPYGTAAAEASFVERSSSSVLASAPLVSAPSAKRARKPYGTAAAEASFVERSSCSVIASAPSAKQAQKPDGTAAAGASSVVRSSSLVLASAPSAKQAREPDGTAAAAGAGASSVVRSSSSVLASAPSAKQAREPDGTAGASSVVRSSSSVTSAPSAKQAQKPAAPSQPPPKAWCEICKIWCHTLGVLEEHKQGRRHMNKVKRQERLEEQKAISELQNKQTATTKSNLTDQAKKVQEPAKVECPTGNTGSEVASVNHKVETMVQNDARDTFAAPAEEPEAKKTSRNIIPVQHHVLKPKKKRKGSKLVKITAALRRPVQNQISEQFIPFDCKLCNVRFESEIAFGSHVNGKEHISRLIHAPGRQALSGMFGLQVLYPPDIDSLSKAINVQVQHGDNNPQLLLAKHLMDSLSQSKVAATAPPMN* 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g2717 580 MobiDBLite consensus disorder prediction 299 321 - -
Amo02g2717 580 SUPERFAMILY beta-beta-alpha zinc fingers 321 363 IPR036236 -
Amo02g2717 580 MobiDBLite consensus disorder prediction 379 408 - -
Amo02g2717 580 Pfam Zinc-finger of C2H2 type 486 510 - -
Amo02g2717 580 Pfam Zinc-finger of C2H2 type 332 355 - -
Amo02g2717 580 SUPERFAMILY beta-beta-alpha zinc fingers 479 514 IPR036236 -
Amo02g2717 580 Coils Coil 357 377 - -
Amo02g2717 580 ProSitePatterns Zinc finger C2H2 type domain signature. 488 510 IPR013087 -
Amo02g2717 580 Gene3D Classic Zinc Finger 311 364 - -
Amo02g2717 580 Gene3D Classic Zinc Finger 473 515 - -
Amo02g2717 580 PANTHER GLUTENIN, HIGH MOLECULAR WEIGHT SUBUNIT 12-LIKE 284 574 - -
Amo02g2717 580 SMART ZnF_U1_5 328 362 IPR003604 GO:0003676|GO:0008270
Amo02g2717 580 SMART ZnF_U1_5 483 517 IPR003604 GO:0003676|GO:0008270
Amo02g2717 580 MobiDBLite consensus disorder prediction 283 329 - -
Amo02g2717 580 PANTHER OS06G0651300 PROTEIN-RELATED 284 574 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g2717 Amo-Chr2 84153000 84156146 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g2717 - - ahf:112728184 847.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g2571 12 109594347 109599869 Amo02g2717 02 84153000 84156146 hybridization