Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2425 ATGACCACCACACATTTCTTCTTGTTCATCACCATTCTCCTCTACTCATGCCACTCTCTCACCGGAGCCGATGATTTCGTTCGCTCCATCGACCGGAGCCTCCTCGGCCTCAACAAAGAAGAGAAGGTTTCACACCTCAAATTCTATTGGCATGACATTGTAAGTGGCAAAAATCCTACTTCAATTGAAGTTATTGCAGCCACAAATAAGATTAACACTACCACCTTTTTCGGTTTGACCCGTATGCTGGACAACCCTTTGACTCTGGGGCCTAACTTGAGCTCCAAGCTTGTTGGGAGGGCTCAAGGGTTTTATTCCTCGACGAGTCAAACCGAAGCTGACCTTCTTATGGCCATGAACTTTGCTTTTGTTGATGGAAAGTATAATGGGAGCTCCATTACCGTCTTGGGGAGAAACCCTATTTTCAACAAGGTAAGAGAGATGCCTGTGATTGGTGGAAGTGGATTCTTTAGGTTTGCTAGGGGTTATGTTCAGCTGAACACTTATTCGGTGAATCTCAAGACTAATGATGCTATTGTTGAGTACAATGTTTATGTCAACCATTATTGA 570 0.4404 MTTTHFFLFITILLYSCHSLTGADDFVRSIDRSLLGLNKEEKVSHLKFYWHDIVSGKNPTSIEVIAATNKINTTTFFGLTRMLDNPLTLGPNLSSKLVGRAQGFYSSTSQTEADLLMAMNFAFVDGKYNGSSITVLGRNPIFNKVREMPVIGGSGFFRFARGYVQLNTYSVNLKTNDAIVEYNVYVNHY* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2425 189 PANTHER NUCLEOPORIN-RELATED 8 188 IPR004265 -
Amo12g2425 189 Pfam Dirigent-like protein 44 186 IPR004265 -
Amo12g2425 189 PANTHER DIRIGENT PROTEIN 7 8 188 - -
Amo12g2425 189 Gene3D - 33 185 IPR044859 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2425 Amo-Chr12 106779987 106780820 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2425 - - gmx:100808529 263.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g2425 12 106779987 106780820 Amo02g2616 02 82364887 82365453 hybridization