Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g2616 ATGATCACCCAAAAAACCCTTACTCTTTTCTTCTTTCTTCTCCTCTCTTTCTACACCTTCACTTCCTCAGCCACCATAGAAGCCGAACCCGCTTTCGAAAACCCTATCGACCGAAAATTACTCGGCCAAGACAAAGAACGAACACTATCCCACTTCAGATTCTATTGGCAAGACATAGTTGGAGGACCAAACGCAACTTCAATCCCAATAGTTCAACCAATTCCAAAGTTCAACACAAGTTCCAGCTTTGGCTTGGTTAGGGTAATAGACAATGCTTTAACCATAGGCCCAAACTTAACCTCCAAGGTTATTGGAAGAGCTCATGGCTTCTATGTCTCGGTTTCGGAAACAGAGCTTGATCTTTTAATGGTGGAAAGCTTTGTATTCTATGAAGGGAGGTACAATGGAAGCACCATTGATATTGTTGGAAGGAACGTTGCTTTGAATAAAGTGAGGGAGATTCCAGTTGTTGGTGGAAGTGGGGTTTTTAGGTTTGCAAAAGGGTATGCTGAATTGAGGACTTTGAAATTTGATGCGGCTTCTGGGGATACTCTTGTTCAGTACGAT 567 0.425 MITQKTLTLFFFLLLSFYTFTSSATIEAEPAFENPIDRKLLGQDKERTLSHFRFYWQDIVGGPNATSIPIVQPIPKFNTSSSFGLVRVIDNALTIGPNLTSKVIGRAHGFYVSVSETELDLLMVESFVFYEGRYNGSTIDIVGRNVALNKVREIPVVGGSGVFRFAKGYAELRTLKFDAASGDTLVQYD 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g2616 189 PANTHER DIRIGENT PROTEIN 7 14 189 - -
Amo02g2616 189 PANTHER NUCLEOPORIN-RELATED 14 189 IPR004265 -
Amo02g2616 189 Pfam Dirigent-like protein 50 189 IPR004265 -
Amo02g2616 189 Gene3D - 38 183 IPR044859 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g2616 Amo-Chr2 82364887 82365453 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g2616 - - adu:107475368 337.035
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g2425 12 106779987 106780820 Amo02g2616 02 82364887 82365453 hybridization