Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2387 ATGGCACCAAAAAACAAGTATGATGAAGCTTCTTGTGTTCAAAACAAATCCATAGTTGAGTCTCTATACAAGGCACTTCTTGGAGAAGGCCAAATGGAAATGGTTTCAAAGGTGCTAGCAAGTGATCTTGAATGGTGGTTCCATGGCCCCCCAGAATGCCAACACATGATGAAGGTCCTCACTGGTGAAACAGCACTCAACAAAGGCTTCAAGTTTGAGCCTAGAAGCTTCACATCCATAGGAGATTGTGTTATCACTGAAGGGTGGGAAGGACAAGCCTATTGGGTTCATGTTTGGACATTGAAGAATGGCTTGATTACTCAATTTAGGGAGTATTTCAACACATGGCTTGTTGTTAGGGATTTGAGTCCTCCAAGGTGGGAGATCAAGCAAAATAGCTTGACTCTCTGGCAGAGCCAGCCTCGCGATTTGTATCGTAGGTCACTTCCGGGGCTGGTTCTAGCCATTTAG 471 0.448 MAPKNKYDEASCVQNKSIVESLYKALLGEGQMEMVSKVLASDLEWWFHGPPECQHMMKVLTGETALNKGFKFEPRSFTSIGDCVITEGWEGQAYWVHVWTLKNGLITQFREYFNTWLVVRDLSPPRWEIKQNSLTLWQSQPRDLYRRSLPGLVLAI* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2387 156 SUPERFAMILY NTF2-like 14 122 IPR032710 -
Amo12g2387 156 Pfam Wound-induced protein WI12 57 156 IPR009798 -
Amo12g2387 156 PANTHER OS05G0342100 PROTEIN 11 156 - -
Amo12g2387 156 Gene3D - 4 128 - -
Amo12g2387 156 PANTHER OS07G0691300 PROTEIN 11 156 IPR009798 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2387 Amo-Chr12 106091539 106092009 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2387 - - cam:101513568 255.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g2387 12 106091539 106092009 Amo12g2387 12 106091539 106092009 ECH
Amo12g2387 12 106091539 106092009 Amo11g0111 11 1498852 1500664 ECH