Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g0111 ATGCCTAGGGCAATTAGGGGAAAGAAACAAAAGAGTGGTGAGGGACTTCTACAAAGCCTTAACCTCCAAAGACACACAAACACTTTATGGGCTTGTGGCTCAAGACTTGGAGTGGTGGTTCCATGGACCACCATGCCATCGCCACCACTTGGTTCCATGGCTGACTGGATCCTCACCATCGCCACCGTCTTTGTTGTTGTGGCCGAAGGGTACGACGAGACCAATTTAATCTGGTGGGTGCACGCATGGACCGTTAATGAAAATGGTGTCATCACTCAAGTTAGAGAATATGTGAACACTGCCCTAACAGTGACTCAACTTGGTGTTGCCACGTCACCATCACAGGCAGTGCAAAATGCCTCTAAATGCTTTAGCATTTGGAAAAGCACTCTTTCGGATGAGTCCTTTTATAAAGTGGAAGAGATCTTTACAAATGCAATTGATGGACTTAAAGATCCTCAAGTTATAAACACAGTTAAAGACATTGTTGTTGATGATGTTAAATACAAGTTTCAAGGGATGGTAGATTCGGATTCTCATGAAATTAAAGACATTGTTGTCGATGAGGTGGAGATCAAGTTGAATTCAATTGCAAACAATAGGATTTGCAAGATGAGTTGA 621 0.4283 MPRAIRGKKQKSGEGLLQSLNLQRHTNTLWACGSRLGVVVPWTTMPSPPLGSMADWILTIATVFVVVAEGYDETNLIWWVHAWTVNENGVITQVREYVNTALTVTQLGVATSPSQAVQNASKCFSIWKSTLSDESFYKVEEIFTNAIDGLKDPQVINTVKDIVVDDVKYKFQGMVDSDSHEIKDIVVDEVEIKLNSIANNRICKMS* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g0111 206 PANTHER OS07G0691300 PROTEIN 62 136 IPR009798 -
Amo11g0111 206 SUPERFAMILY NTF2-like 71 108 IPR032710 -
Amo11g0111 206 Pfam Wound-induced protein WI12 65 134 IPR009798 -
Amo11g0111 206 PANTHER WOUND-INDUCED PROTEIN, WUN1-RELATED 62 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g0111 Amo-Chr11 1498852 1500664 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g0111 - - gmx:102664858 94.7449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g0111 11 1498852 1500664 Amo11g0111 11 1498852 1500664 ECH
Amo12g2387 12 106091539 106092009 Amo11g0111 11 1498852 1500664 ECH