Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2284 ATGGTCGGAAAAGCCATGGCCCCGACCTCGCGCGAGAAGCTCGCCAACCTCTTCAACTCTGCCAAGTTCGCCGGTGATGTAACTTCCAAGCTCGATACTCTCCGCCGGTTGCGGCGCCAACTTCCGCCGGAGGACCCCGTAATCCTCGCCGAGTTYCTCCCGTCGCTTTTCGAATTMCTCTCTGATCAATTCAGCCCCGTTCGCAAGTTTGTCACCGAGATGGTTGGTGAAATTGGATTGAAGAACACGGAGTTCCTGCCAGACATTGTGCCTGTGCTGATTGAAGTGTTGGACGATGACACTCCTGCTGTTGTTCGACAAGTTATATTGCTGGGAATCGATTTGTTTCGTTCCACGCTTGAGAAAATCGCACTTCAGGGTCTATATTCTAGTGATTTAGACAGTGCACTTGAATCTGCATGGGTATGGATGGTGAAATTCAAAGATAAAGTATACTCAATTGCTTTTCAACATGGAAGTGGTGGTGCAAGGCTGCTGGCACTGAAGTTTGTTGAAGCAGTTATTCGTCTTTACACACCTGATCCCAATGGTTCCTTGGAGCCCACTCCTCATCAAGGAAGGCCCATGGGGTTTAATATATCATGGCTGAGGCGTGGTCATCCTGTGCTTAATGTTCGTGATTTGTCAACTGAAGCTAGTCACAGTTTGGGTCTCCTGCTTGATCAACTCAGGTCTCCAACTGTGAAGTCTCTGAGTAACTCAGTGATCATTGTGCTAATTAAAAGCCTTTCAGCTATTGCAATAGACAGGCCTACATTCTATGGCCGCATCTTGCCAGTTTTGCTCAATTTGGAACCCTCGAGCACTGTTGTTAATGGGGTGAGTGTAACAGCGGCACATCTTGCTTTGAAGAATGCCTTTCTGACATGCTCAAAATGTACACATCCAAGTGCTGCTCCGTGGAGAGATCGTTTGGCTGGTGCCTTGAAGGAGATGCAGTCTGATGGGAAGGCAGACCAGGTTTTCCACCTGATATCTGATATTAACGGAAGCTTAGAGAAAGAGAAAGATGTTGAACCACTTATCAAGAAAGAGGAACATGCTGTAAATTCATGTGATTCAGTGCACAGTAATTTGGCTGGTAAGCGAGCAGGATCACAAAATGGAGGTGATTTAGCTGAAGATGAAGATGTGCCTATCAAACGTGTCAAAACAACTTCTGATTTAAAGGAACCTAAGAAAGAGTTAGACAGAGGTACCACTAACTCTCAGGATGACACTCCTTCAACGGCTCCAAAATCATCAAAAGGAGATGTAGATAATGGCCATGTGCAGCAGCTTGTTGCCATGTTTGGTGCTTTGGTTGCACGAGGTGAAGAAGCTGTTGCMTCCTTGGAAATTCTTATATCAAGTATTTCTGCTGACTTGCTTGCYGATGTGGTGATGGCSAATATGCRTCACCTACCTTACCCGAATTCCGAAGGAGATGATGAACTGCTGCATGACATCAACATTATTGGTTCTGATGACAAGGCTAAATATCCACCATCTTTTGTGGCTGGCGTCATGTCACTTTCCAGTACTTTCCCACCAATAGCATCACTTCTTGGTGCTCATCAATCCGTCTCCAATGARAGGTCTCAAGGGGACGAAGAAGTTTCTGCAAGTGGGGTAGATAGTGCTGCTGTGCATTCTGGACTAATTCTTACTTCCGAAAATGTCTCCTCTCCTACTGACTTTCCGTCCTCTGATGCCAGCATACCTGGAGTGGAGAATGGATGTGCAACTGTGCCTTCTAATATTCATGATATTGGAAACATAGAGAGTGGAATCCCTGGCCTGGATTCTTTCGGTCGTAGTGATGCTTATTCAGAAAGTTTGGCTGCTTCCTCATTGGCCTCCTCTGAGATTCAACATGAAGAAACTAATCAAGAACAAGCAACTAGTTTAGATCAAAGGTCACCACTAAACTTAGTTACATCAGTATCTACAGATAGATCTGAGGAGCTCAGCCCAAAAGCAGCTGTTGCAGATGTCAACAGCTTGGTGTCGTCAACTGCTACTTCGGTTGTGTTGCCTTCCCGTGTAGTCCTGCCAAAGATGATTGCACCTGTTGTTGACCATTCAGATGAGCAAAAGGATCAATTGCAAAAGTTGTGTTTCATGCGTATYGTTGATGCATATAAGCAAATAGCTGTAGCTGGAGGATCACAAGTCCGATTTTCAATACTTGCTTATTTAGGAGTAGAGTTTCCCTTGGAATTAGACCCGTGGAAACTATTACAAGATCATATTTTGGTTGATTATACTGGTCATGAGGGACACGAGTTGACATTGCGTGTCCTCTACAGGTTATTTGGTGAGGCTGAAGAGGAGCCTGACTTCTTTTCTTCCACAACTGCAGCTTCTGCATATGAAACATTCCTCCGAACGGTGGCAGAAGCACTTAGAGATTCTTTCCCACCTTCAGATAAATCATTAAGCAAACTGCTCAGTGAATCACCATATTTACCAAAATCAGTTTTGAAAATTCTAGAGAACATGTGTTCTCCTGGAAATGGGGATAACATTGAAAAGGAGTCAAACTCTYTGAATGCCGACAGAGTTACTCAAGGTCTCAGTGCTGTATGGAGTTTGATTCTTCTGAGGCCTCCCATTCGGAATACCTGCTTAAAAATTGCTTTACAGAGTGCAGTGCATCACATGGAAGAAGTGCGTATGAAGGCAATACGTCTGGTGGCAAATAAGCTTTATCCTTTACCATCCATTTCTAAGCAAATAGAAGATTTTGCAAAAGAGATGTTGTGCTCAGTGACAAGTGATGCATCTGAAGCTACTGATGCTGAAGGATCCCTTGCTGATTTACAAAAGGGACCTGATACTGAAAAGCTTGCAAATGAGACATCATCAATGACTAGCAGCACTAAGGACATCTCAGCAGATAATCATCAATCAGTCGCATCTGAAAGTATCTCTCCAGAATCAGTTCTTGAGGCTCAGAGGTTAATGTCATTGTATTTTGCTTTGTGTACGAAGAAACACTCTCTCTTTCGCCAAATATTTTCCATCTATAAGAGCACATCAAAAGCAGTGAAGCAGGCAGTTCAGCGTCAAATTCCTATATTAGTACGTACTATGGGCTCATCTCCAGATCTCCTTGAAATTATTTCAGATCCTCCAATTGGTAGCGAGAGCCTCCTAATGCAGGTGTTACATACACTTACAGATGGTACAGTCCCTTCTAGGGATTTAGTGGTTACAGTGAAGCAGTTGCATGATTCAAAACTTAAGGATGCGGAGGTTCTTATTCCAATATTACCATTCTTACAAAAAGATGAGGTAATGCCAGCTTTTCCGAATATTGTGAATCTTCCTTTGGAGAAGTTCCAAGCAGCGCTTAGTCGCATGTTGCAGGGATCATCACAATCTGGTCCTGTGCTCACACCTGCTGAAGTTTTAATTGCAATACATGGAGTTGACCCAGAAAGAGATGGGATTCCCTTGAAAAAGGTCACAGATGCATGTAATGCTTGCTTTGAGCAACGACAAACTTTTACCCAGGAAGTTCTTGCGAAAGTTTTGAATCAATTAGTTGAGCAGATTCCTCTTCCTTTACTGTTTATGCGTACAGTGTTGCAAGCAATTGGTGCTTTTCCAACGTTGGTAAGAAGCTTTTCCAAGTAA 3645 0.4359 MVGKAMAPTSREKLANLFNSAKFAGDVTSKLDTLRRLRRQLPPEDPVILAEFLPSLFEXLSDQFSPVRKFVTEMVGEIGLKNTEFLPDIVPVLIEVLDDDTPAVVRQVILLGIDLFRSTLEKIALQGLYSSDLDSALESAWVWMVKFKDKVYSIAFQHGSGGARLLALKFVEAVIRLYTPDPNGSLEPTPHQGRPMGFNISWLRRGHPVLNVRDLSTEASHSLGLLLDQLRSPTVKSLSNSVIIVLIKSLSAIAIDRPTFYGRILPVLLNLEPSSTVVNGVSVTAAHLALKNAFLTCSKCTHPSAAPWRDRLAGALKEMQSDGKADQVFHLISDINGSLEKEKDVEPLIKKEEHAVNSCDSVHSNLAGKRAGSQNGGDLAEDEDVPIKRVKTTSDLKEPKKELDRGTTNSQDDTPSTAPKSSKGDVDNGHVQQLVAMFGALVARGEEAVASLEILISSISADLLADVVMANMXHLPYPNSEGDDELLHDINIIGSDDKAKYPPSFVAGVMSLSSTFPPIASLLGAHQSVSNERSQGDEEVSASGVDSAAVHSGLILTSENVSSPTDFPSSDASIPGVENGCATVPSNIHDIGNIESGIPGLDSFGRSDAYSESLAASSLASSEIQHEETNQEQATSLDQRSPLNLVTSVSTDRSEELSPKAAVADVNSLVSSTATSVVLPSRVVLPKMIAPVVDHSDEQKDQLQKLCFMRIVDAYKQIAVAGGSQVRFSILAYLGVEFPLELDPWKLLQDHILVDYTGHEGHELTLRVLYRLFGEAEEEPDFFSSTTAASAYETFLRTVAEALRDSFPPSDKSLSKLLSESPYLPKSVLKILENMCSPGNGDNIEKESNSLNADRVTQGLSAVWSLILLRPPIRNTCLKIALQSAVHHMEEVRMKAIRLVANKLYPLPSISKQIEDFAKEMLCSVTSDASEATDAEGSLADLQKGPDTEKLANETSSMTSSTKDISADNHQSVASESISPESVLEAQRLMSLYFALCTKKHSLFRQIFSIYKSTSKAVKQAVQRQIPILVRTMGSSPDLLEIISDPPIGSESLLMQVLHTLTDGTVPSRDLVVTVKQLHDSKLKDAEVLIPILPFLQKDEVMPAFPNIVNLPLEKFQAALSRMLQGSSQSGPVLTPAEVLIAIHGVDPERDGIPLKKVTDACNACFEQRQTFTQEVLAKVLNQLVEQIPLPLLFMRTVLQAIGAFPTLVRSFSK* 1215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2284 1214 MobiDBLite consensus disorder prediction 934 968 - -
Amo12g2284 1214 PANTHER SYMPLEKIN/PTA1-RELATED 1 1209 - -
Amo12g2284 1214 SUPERFAMILY ARM repeat 33 1061 IPR016024 -
Amo12g2284 1214 SUPERFAMILY ARM repeat 34 322 IPR016024 -
Amo12g2284 1214 Pfam Symplekin tight junction protein C terminal 1085 1209 IPR022075 -
Amo12g2284 1214 MobiDBLite consensus disorder prediction 360 428 - -
Amo12g2284 1214 Pfam Symplekin/PTA1 N-terminal 102 320 IPR032460 -
Amo12g2284 1214 Gene3D - 2 342 IPR011989 -
Amo12g2284 1214 MobiDBLite consensus disorder prediction 409 428 - -
Amo12g2284 1214 MobiDBLite consensus disorder prediction 381 408 - -
Amo12g2284 1214 MobiDBLite consensus disorder prediction 949 968 - -
Amo12g2284 1214 PANTHER PHOSPHATIDYLINOSITOL 3-AND 4-KINASE FAMILY PROTEIN-RELATED 1 1209 - -
Amo12g2284 1214 MobiDBLite consensus disorder prediction 620 642 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2284 Amo-Chr12 103264536 103274757 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2284 K06100 - gmx:100779360 1817.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g2284 12 103264536 103274757 Amo12g2284 12 103264536 103274757 ECH
Amo12g2284 12 103264536 103274757 Amo02g2524 02 79052615 79065144 hybridization