Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g2524 ATGGTCGGAAAAGCCATGGCCCCGACCTCGCGCGAGAAGCTTGCCAACCTCTTCAACTCTGCCAAGTTCGCCGGTGATGTAACTTCCAAGCTCGATACTCTCCGCCGGTTGCGGCGCCAACTTCCGCCGGAGGACCCCGTAATCCTCGCCGAGTTCCTCCCGTCGCTTTTCGAATTCCTCTCTGATCAATTCAGCCCCGTTCGCAAGTTTGTCACCGAGATGGTTGGTGAAATTGGATTGAAGAACACGGAGTTCCTGCCAGACATTGTGCCTGTGCTGATTGAAGTGTTGGACGATGACACTCCTGCTGTTGTTCGACAAGTTATATTGCTGGGAATCGATTTGTTTCGTTCCACGCTTGAGAAAATCGCACTTCAGGGTCTATATTCTAGTGATTTAGACAGTGCACTTGAATCTGCATGGGTATGGATGGTGAAATTCAAAGATAAAGTATACTCAATTGCTTTTCAACATGGAAGTGGTGGTGCAAGGCTGCTGGCACTGAAGTTTGTTGAAGCAGTTATTCGTCTTTACACACCTGATCCCAATGGTTCCTTGGAGCCCACTCCTCATCAAGGAAGGCCCATGGGGTTTAATATATCATGGCTGAGGCGTGGTCATCCTGTACTTAATGTTCGTGATTTGTCAACTGAAGCTAGTCACAGTTTGGGTCTGCTGCTTGATCAACTCAGGTCTCCAACTGTGAAGTCTCTGAGTAACTCAGTGATCATTGTGCTAATTAAAAGCCTTTCAGCTATTGCAATAGACAGGCCTACATTCTATGGCCGCATCTTGCCAGTTTTGCTCAATTTGGAACCCTCGAGCACTGTTGTTAATGGGGTGAGTGTAACAGCGGCACATCTTGCTTTGAAGAATGCCTTTCTGACATGCTCAAAATGTACACATCCAAGTGCTGCTCCGTGGAGAGATCGTTTGGCTGGTGCCTTGAAGGAGATGCAGTCTGATGGTAAGGCAGACCAGGTTTTCCACCTGATATCTGATATTAACGGAAGCTTAGAGAAAGAGAAAGATGTTCAACCACTTATCAAGAAAGAGGAACATGCTGTAAATTCATGTGATTCAGTGCACAGTAATTTGGCTAGTAAGCGAGCAGGATCACAAAATGGAGGTGATTTAGCTGAAGATGAAGATGTGCCTATAAAACGTGTCAAAACAACTTCTGATTTAAAGGAACCTAAGAAAGAGTTAGGCAGAGGTACCACTAACTCTCAGGATGACACTCCTTCAATGGGTCCAAAATCATCAAAAGGAGATGTAGATAATGGCCATGTGCAGCAGCTTGTTGCCATGTTTGGTGCTTTGGTTGCACGAGGTGAAGAAGCTGTTGCATCCTTGGAAATTCTTATATCAAGTATTTCTGCTGACTTGCTTGCTGATGTGGTGATGGCAAATATGCATCACCTACCTTACCCGAATTCCGAAGGAGATGATGAACTGCTGCATGACATCAACATTATTGGTTCTGATGACAAGGCTAAATATCCACCATCTTTTGTGGCTGGCGTCATGTCACTTTCCAGTACTTTCCCACCAATAGCATCACTTCTTGGTGCTCATCAATCCGTCTCCAATGAGAGGTCTCAAGGGGACGAAGAAGTTTCTGCAAGTGGGGTAGATAGTGCTGCTGTGCATTCTGGACTAATTCTTACTTCCGAAAATGTCTCCTCTCCTACTGACTTTCCGTCCTCTGATGCCAGCATACCTGGAGTGGAGAATGGATGTGCAACTGTGCCTTCTAATATTCATGATATTGGAAACATAGAGAGTGGAATCCCTGGCCTGGATTCTTTCGGTCGTAGTGATGCTTATTCAGAAAGTTTGGCTGCTTCCTCGTTGGCCTCGTCTGAGATTCAACATGAAGAAACTAATCAAGAACAAGCAACTAGTTTAGATCAAAGGTCACCACTGAACTTAGTTACATCAGTATCTACAGATAGATCTGAGGAGCTCAGCCCAAAAGCAGCTGTTGCAGATGTCAACAGCTTGGTGTCATCAACAGCTACTTCGGTTGTGTTGCCTTCCCGTGTAGTCCTGCCAAAGATGATTGCACCTGTTGTTGACCATTCAGATGAGCAAAAGGATCAATTGCAAAAGTTGTGTTTCATGCGTATTGTTGATGCATATAAGCAAATAGCTGTAGCTGGAGGATCACAAGTCCGATTTTCAATACTTGCTTATTTAGGAGTAGAGTTTCCCTTGGAATTAGACCCGTGGAAACTATTACAAGATCATATTTTGGTTGATTATACTGGTCATGAGGGACACGAGTTGACATTGCGTGTCCTCTACAGGTTATTTGGTGAGGCTGAAGAGGAGCCTGACTTCTTTTCTTCCACAACTGCAGCTTCTGCATATGAAACATTCCTCCGAACGGTGGCAGAAGCACTTAGAGATTCTTTCCCACCTTCAGATAAATCATTAAGCAAACTGCTCAGTGAATCACCATATTTACCAAAATCAGTTTTGAAAATTCTAGAGAACATGTGTTCTCCTGGAAATGGGGATAACATTGAAAAGGAGTCAAACTCTTTGAATGCCGACAGAGTTACTCAAGGTCTCAGTGCTGTATGGAGTTTGATTCTTCTGAGGCCTCCCATTCGGAATACCTGCTTAAAAATTGCTTTACAGAGTGCAGTGCATCACATGGAAGAAGTGCGTATGAAGGCTATACGTCTGGTGGCAAATAAGCTTTATCCTTTACCATCCATTTCTAAGCAAATAGAAGATTTTGCAAAAGAGATGTTGTGCTCAGTGACAAGTGATGCATCTGAAGCTACTGATGCTGAAGGATCCCTTGCTGATTTACAAAAGGGACCTGATACTGAAAAGCTTGCAAATGAGACATCATCAATGACTAGCAGCACTAAGGACATCTCAGCAGATAATCATCAATCAGTCGCATCTGAAAGTATCTCTCCAGAATCAGTTCTTGAGGCTCAGAGGTTAATGTCATTGTATTTTGCTTTGTGTACGAAGAAACACTCTCTCTTTCGCCAAATATTTTCCATCTATAAGAGCACATCAAAAGCAGTGAAGCAGGCAGTTCAGCGTCAAATTCCTATATTAGTACGTACTATGGGCTCATCTCCAGATCTCCTTGAAATTATTTCAGATCCTCCAATTGGTAGCGAGAGCCTCCTAATGCAGGTGTTACATACACTTACAGATGGTACAGTCCCTTCTAGGGATTTAGTGGTTACAGTGAAGCAGTTGCATGATTCAAAACTTAAGGATGCGGAGGTTCTTATTCCAATATTACCATTCTTACAAAAAGATGAGGTAATGCCAGCTTTTCCGAATATTGTGAATCTTCCTTTGGAGAAGTTCCAAGCAGCGCTTAGTCGCATGTTGCAGGGATCATCACAAGCTGGTCCTGTGCTCACACCTGCTGAAGTTTTAATTGCAATACATGGAGTTGACCCAGAAAGAGATGGGATTCCCTTGAAAAAGGTCACAGATGCATGTAATGCTTGCTTTGAGCAACGACAAACTTTTACCCAGGAAGTTCTTGCCAAAGTTTTGAATCAATTAGTTGAGCAGATTCCTCTTCCTTTACTGTTTATGCGTACAGTGTTGCAAGCAATTGGTGCTTTTCCAACGTTGGTGGACTTTATAATGGGAATTCTCTCGCGGCTCGTGAGGAAGCAGATTTGGAAATACCCAAAGTTGTGGGTGGGATTCTTGAAGTGTGCTCAGTTGACAAAACCTCAATCATTTGGAGTTTTGCTTCAGCTACCTCCAGCACAATTGGAAAATGCGTTAAATAGAATTGCAGCACTAAAGGCACCATTGGTTGCTTATGCTAGCCAGCCAGATATACAGTCTACACTTCCCAGGTCTGTGCTGGTTGTTCTGGGAATTGTATCAGACTCTCAGGTTACAAGTCAGGTACAAACTAGTCAAACAGAGACTGCAGAGACATCCAACTCCGAAAAGGATACGGCAACAGAAAAATCTAAAGAATCATCTACGGCTAGCTGA 4002 0.4368 MVGKAMAPTSREKLANLFNSAKFAGDVTSKLDTLRRLRRQLPPEDPVILAEFLPSLFEFLSDQFSPVRKFVTEMVGEIGLKNTEFLPDIVPVLIEVLDDDTPAVVRQVILLGIDLFRSTLEKIALQGLYSSDLDSALESAWVWMVKFKDKVYSIAFQHGSGGARLLALKFVEAVIRLYTPDPNGSLEPTPHQGRPMGFNISWLRRGHPVLNVRDLSTEASHSLGLLLDQLRSPTVKSLSNSVIIVLIKSLSAIAIDRPTFYGRILPVLLNLEPSSTVVNGVSVTAAHLALKNAFLTCSKCTHPSAAPWRDRLAGALKEMQSDGKADQVFHLISDINGSLEKEKDVQPLIKKEEHAVNSCDSVHSNLASKRAGSQNGGDLAEDEDVPIKRVKTTSDLKEPKKELGRGTTNSQDDTPSMGPKSSKGDVDNGHVQQLVAMFGALVARGEEAVASLEILISSISADLLADVVMANMHHLPYPNSEGDDELLHDINIIGSDDKAKYPPSFVAGVMSLSSTFPPIASLLGAHQSVSNERSQGDEEVSASGVDSAAVHSGLILTSENVSSPTDFPSSDASIPGVENGCATVPSNIHDIGNIESGIPGLDSFGRSDAYSESLAASSLASSEIQHEETNQEQATSLDQRSPLNLVTSVSTDRSEELSPKAAVADVNSLVSSTATSVVLPSRVVLPKMIAPVVDHSDEQKDQLQKLCFMRIVDAYKQIAVAGGSQVRFSILAYLGVEFPLELDPWKLLQDHILVDYTGHEGHELTLRVLYRLFGEAEEEPDFFSSTTAASAYETFLRTVAEALRDSFPPSDKSLSKLLSESPYLPKSVLKILENMCSPGNGDNIEKESNSLNADRVTQGLSAVWSLILLRPPIRNTCLKIALQSAVHHMEEVRMKAIRLVANKLYPLPSISKQIEDFAKEMLCSVTSDASEATDAEGSLADLQKGPDTEKLANETSSMTSSTKDISADNHQSVASESISPESVLEAQRLMSLYFALCTKKHSLFRQIFSIYKSTSKAVKQAVQRQIPILVRTMGSSPDLLEIISDPPIGSESLLMQVLHTLTDGTVPSRDLVVTVKQLHDSKLKDAEVLIPILPFLQKDEVMPAFPNIVNLPLEKFQAALSRMLQGSSQAGPVLTPAEVLIAIHGVDPERDGIPLKKVTDACNACFEQRQTFTQEVLAKVLNQLVEQIPLPLLFMRTVLQAIGAFPTLVDFIMGILSRLVRKQIWKYPKLWVGFLKCAQLTKPQSFGVLLQLPPAQLENALNRIAALKAPLVAYASQPDIQSTLPRSVLVVLGIVSDSQVTSQVQTSQTETAETSNSEKDTATEKSKESSTAS* 1334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g2524 1333 MobiDBLite consensus disorder prediction 949 970 - -
Amo02g2524 1333 SUPERFAMILY ARM repeat 33 1204 IPR016024 -
Amo02g2524 1333 Pfam Symplekin/PTA1 N-terminal 102 320 IPR032460 -
Amo02g2524 1333 MobiDBLite consensus disorder prediction 934 970 - -
Amo02g2524 1333 MobiDBLite consensus disorder prediction 381 407 - -
Amo02g2524 1333 Pfam Symplekin tight junction protein C terminal 1085 1263 IPR022075 -
Amo02g2524 1333 MobiDBLite consensus disorder prediction 620 643 - -
Amo02g2524 1333 PANTHER PHOSPHATIDYLINOSITOL 3-AND 4-KINASE FAMILY PROTEIN-RELATED 1 1236 - -
Amo02g2524 1333 MobiDBLite consensus disorder prediction 1302 1316 - -
Amo02g2524 1333 Gene3D - 2 341 IPR011989 -
Amo02g2524 1333 MobiDBLite consensus disorder prediction 1302 1333 - -
Amo02g2524 1333 PANTHER SYMPLEKIN/PTA1-RELATED 1 1236 - -
Amo02g2524 1333 SUPERFAMILY ARM repeat 31 328 IPR016024 -
Amo02g2524 1333 MobiDBLite consensus disorder prediction 367 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g2524 Amo-Chr2 79052615 79065144 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g2524 K06100 - gmx:100779360 1999.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g2284 12 103264536 103274757 Amo02g2524 02 79052615 79065144 hybridization