Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2252 ATGTTGGTGGATGGCTGTTTCTTGCTAGAACTTCTCCATAGGCTTGGGGAATACATGGATCCACATACAAACCAGGGCGAAACTTTTTCCAATGACCCATTCTTAGAGACAGAGGAGAAGGTGCAGTGTGTGCTGAATGATATTTCGATGCTGGAAAATCAGATCCCTTTCATTGTTCTCAAGAAGTTGTACAATAATGTCTTCCCTGAAAACAACAACAATTACAACCGTAACAAGGTTGCAGAAGATCATCGTGTGGCCGATGTCATGCGTAAAGCCTTTGGTTACAATTCAAAAGACCGGCATGGTTCGGCTCATATGCTTCACTTAATGCACTTGTCCACAGTTGAAGAAGACAACAATCAAGAAGCCAAACGATTGAGACAAGCATGCCGAGAACTAAAGCGATGCGCTACTAGGCTTCGAGCTGCAGGAATAACCATTAAACCAACAAATAGCAACAGCATTGCAAATGGTAATGTCAATGCTAATACTAGTGTTAACAATCAGCATAAGCTTGTGGACATATTTGATTTTAACATAAGTTTCAATGAGCAAGACAAGATACTCGAAATACCGGCTTTGCATATTAAGGAAACAACGGAAGCGAGATGGAGAAACTTGATTGCTTGGGAGCAGAGCAGAATTTGGATAAGAGGCAAGTACACTTCCTATGCTTTGTTCTTCCAAACTTTGATATGCTGTGAGCATGACCTCAAGTTTCTGGAGAAAAAGGGAGTGATAGTGAATGAGTTCAAGAAGAGCAATGCTGAAATTATGACAATGTTTCGCACCATCTCTGATGGTGTTGATCACATGGATTCAAGTTACAGTGACCACTGTATGAAACTTAATGCACACCGGACTACATTGGTCACGAAAGCGTTTCGCGAATGGCCTATAATCACTTGGCATAGGTGCAGGCATGTTCTTGAGACTCTTGTGTTCTATTGGTGGAACTGGCTAGCGATTTTGATACGCGATCATATCCCAACAGTGTGGAAATTTTTCGGCGTTGTGGCCGCGATTGTGTTGCTTGTTCTCACAATTATGCAGACATATTATTCAGCTAAGCAGACACATTATTCAGCTGAGCAGGCACATAATGCAACTAGTGGCTCTTAA 1125 0.4187 MLVDGCFLLELLHRLGEYMDPHTNQGETFSNDPFLETEEKVQCVLNDISMLENQIPFIVLKKLYNNVFPENNNNYNRNKVAEDHRVADVMRKAFGYNSKDRHGSAHMLHLMHLSTVEEDNNQEAKRLRQACRELKRCATRLRAAGITIKPTNSNSIANGNVNANTSVNNQHKLVDIFDFNISFNEQDKILEIPALHIKETTEARWRNLIAWEQSRIWIRGKYTSYALFFQTLICCEHDLKFLEKKGVIVNEFKKSNAEIMTMFRTISDGVDHMDSSYSDHCMKLNAHRTTLVTKAFREWPIITWHRCRHVLETLVFYWWNWLAILIRDHIPTVWKFFGVVAAIVLLVLTIMQTYYSAKQTHYSAEQAHNATSGS* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2252 374 PANTHER DUF247 DOMAIN PROTEIN 1 359 - -
Amo12g2252 374 Pfam Plant protein of unknown function 1 348 IPR004158 -
Amo12g2252 374 PANTHER PROTEIN, PUTATIVE (DUF247)-RELATED-RELATED 1 359 IPR004158 -
Amo12g2252 374 Coils Coil 113 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2252 Amo-Chr12 102543879 102546204 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2252 - - aip:107625730 641.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g2252 12 102543879 102546204 Amo02g2487 02 78561254 78563943 hybridization