Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g2487 ATGACTCCTGACAAGTCGAAGGACGAAACTGAATGGATGATTCCCGTTGAAGTGATGCTGGGTTCTCTTGACCACGGAGAAGTTCAAGCGTGCAGCATTTCAAGAATCCCAGACGAGATTCGAGCCCCAAAACAAGAATGTTACAAGCCAAAATTGGTGTCTGTAGGACCCTTACACAGGGGAGCCACAAGGCAGATTCTCTTAATGGAAGAACCCAAATGGCGCTACGCCAAGTCCTTCCTTGACCGCAAGGTGCAAAACAACCAAGGAGGACACAAAAAACAAGAACCAGGACCCCGAGAGTGGGGTAAGGAAATTCTCAAGCTTGACAAGGTGGTTCGCGCTTCCTACGGCGGTGACCTCGACTTGGATCCCCAGGACCTCGCCAAAATCATGTTGGTGGATGGCTGTTTCTTGCTAGAACTTCTCCATAAGCTTGGGGAATACATGGATCCACAGACAAACCAGGGCGAAAATTTTTCCAATGACCCATTCCTAGAGACAGAGGAGAAGGTGCAGTGTGTGCTGAATGATATTTCAATGCTGGAAAATCAGATCCCTTTCATTGTTCTCAAGAAGTTGTACAATAATGTCTTCCCTGAAAACAACAACAATTACAACCGTAATAGGGTTGCAGAAGATCATCGTGTGGCCGATGTCATTCGTAAAGCCTTTGGTTACCAGTCAAAAGACCGGCATGGTTCGGCTCATATGCTTCACTTAATGCACTTGTCCACAGTTGAAGAAGACAACAATCAAGAAGCCAAACGATTGAGACAAGCATGCCGAGAACTAAAGCGATGCGCTACTAGGCTTCGAGCTGCAGGAATAACCATTAAACCAACAAATAGCAACAGCATTGCAAATGGTAATGTCAATGCTAGTACTAGTGTTAACAATCAGCATAAGCTTGTGGACATATTTGATTTTAACATAAGTTTCAATGAGCAAGACAAGATACTCGAAATACCGGCTTTGCATATTAAGGAAACAACGGAAGCGAGATGGAGAAACTTGATTGCTTGGGAGCAGAGCAGAATTTGGATAAGAGGCAAGTATACTTCCTATGCTTTGTTCTTCCAAACTTTGATATGCTGTGAGCATGACCTCAAGTTTCTGGAGAAAAAGGGAGTGATAGTGAATGAGTCCAAGAAGAGCAATGCTGAAATTATGACAATGTTTCGCACCATCTCTGATGGTGTTGATCACATGGATTCAAGTTACAGTGATCACTGTAAGAAACTTAATGCACACCGGACTACATTGGTCACGAAAGCATTTCGCGAATGGCCTATAATCACTTGGCATAGGTGCAGGCATGTTCTTGAGATTCTTGTGTTCTATTGGTGGAACTGGCTAGGAATTTTGATACGCGATCATATCCCAACAGTGTGGAAATTTTTCGGCGTTGTGGCCGCGATTGTGTTGCTTGTTCTCACCATTATGCAGACATATTATTCAGCTAAGCAGACACATTATTCAGCTGAGCAGGCACGTAATGCAACTAGTGGCTCTTAG 1518 0.4407 MTPDKSKDETEWMIPVEVMLGSLDHGEVQACSISRIPDEIRAPKQECYKPKLVSVGPLHRGATRQILLMEEPKWRYAKSFLDRKVQNNQGGHKKQEPGPREWGKEILKLDKVVRASYGGDLDLDPQDLAKIMLVDGCFLLELLHKLGEYMDPQTNQGENFSNDPFLETEEKVQCVLNDISMLENQIPFIVLKKLYNNVFPENNNNYNRNRVAEDHRVADVIRKAFGYQSKDRHGSAHMLHLMHLSTVEEDNNQEAKRLRQACRELKRCATRLRAAGITIKPTNSNSIANGNVNASTSVNNQHKLVDIFDFNISFNEQDKILEIPALHIKETTEARWRNLIAWEQSRIWIRGKYTSYALFFQTLICCEHDLKFLEKKGVIVNESKKSNAEIMTMFRTISDGVDHMDSSYSDHCKKLNAHRTTLVTKAFREWPIITWHRCRHVLEILVFYWWNWLGILIRDHIPTVWKFFGVVAAIVLLVLTIMQTYYSAKQTHYSAEQARNATSGS* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g2487 505 Coils Coil 244 275 - -
Amo02g2487 505 PANTHER DUF247 DOMAIN PROTEIN 8 490 - -
Amo02g2487 505 Pfam Plant protein of unknown function 33 479 IPR004158 -
Amo02g2487 505 PANTHER PROTEIN, PUTATIVE (DUF247)-RELATED-RELATED 8 490 IPR004158 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g2487 Amo-Chr2 78561254 78563943 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g2487 - - aip:107625730 845.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g2252 12 102543879 102546204 Amo02g2487 02 78561254 78563943 hybridization