Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2243 ATGATGAAGTTTCACAAGTTACTGAAGCTACAACCAGCTCCATTTTTCATGTTAGGTTTGCTGATAAGCTACAACTCCATGGACAATTGGCTAAATTCTACGATGATGGACTATCTCACAGAGTCACTGAATAGTGAAAGGGGTAGTGCTATGGTTAGAAATATGCAAGATGGCTTGTCATGTCTGTTTGTCGTGATTGCTTATCTAATGTCAGAAGCCTACACCGGCAGTTTCACTGCAATAAGTTTTTGTGCAAGTGCCTCCACCATGGGTTCAATGTTGTTCTGGATATCTTCAATGTCAGATCGCGAGTACTTCGAATATTATATGGTCACTGTAGCAATTGCTCTTCTTACAATGGGAAACATCGCCGGTAAATGTTTGTCCCAAGATTTTTTCGACTCTCATTTGGAGGAGACAGCGAGAGCTAAAAAAGAAGAGTTAGGACAACAATGCACAAACAACAATGCAAGGCTATACGGTATCTCTTTTGCGTGGACGATCTCTCTATTTTTTTGTTCGTTTGGCGCAGTCTTTATTTGCTCTGTAGTTGCTGGTGATAATCCGTGGCACGGCATTAGATTTGTGTCACCATTCATGGTAGGGAGCTATATGTTGTTCTACTTTGGATATGCATGGTACAACCATGAAGATTTGCTTCCTGAAAGCAATGTTGGCAAGTTTTGTAGAGTGTGCAAAGCAGCTTATAGGAAAAGGATTTTGGCATATTTAACCAYAGAAGATGGATATTACTGGAAGAATTATAAGCAGGGACATCTCTATGAGGCTAACCATGGCCAAGACCGGGTTGTAAGGTTGTTACCGCGAGTACCTCGGGGGTTTGGATGGTTGGAAAAAGCAGCTATAATTGACAAGAAACAAACTGAAAATGATGATGTTAGTCCCCATATGCAAGAGACGAAAGGGGAGCTTTGCACAGTTAAGCAAGTTAGAGAAGCCAAGAGCATTGTTTTGTTGCTCTGTTGGGGGTTTTGCTTATTCCCTTACAGTTTTGTTGCGGCTTCTGGGAACACTTTTTTTGTTTCACAAGCGAGCAGTTTGAAAATTTTCATGCTTATTGACATTTCCTATCTCTTCCTCCTCAAGACCACCATGACTGGCATGGTAATACCAATGCTTTTCCTGATACTGGAAGAACCTAATGTGGCTAAGAAGATCAGCAAGATCATCATCAAATTTGGAGCCAATAGAAAAATAATAGATTCAACGACCGTAAACATTGGTATTGGAATGTTTCTTGCTGCGATTTGTTGTGTCTTCGCATGGAGTGTGGAAAATCATATACTGTATTCGACAGGAATTATGAGTACAAAGGCCTTGATTCCACAATTTCTGTTGTTGGGAATGGCGGAAGGGCTTGTTGAAGGCCAAGACGGTCTATCCAGGTTATTCGAGAACTACGCATCAGAATCTGTGAGGAACTTTGCTGAGCCATTCAGTAATCTGGTGATTGGTTTAGGAAAACTCTTGAGCATACCATGGTTCTTGATTTTCGACAGGTGGCTTTATGAATCAAACAACACCGCCGGCCGCCATTTGGACAAATATTTTCTCATGTTAGCAATACTCAATATTGTGTCTCTTATCGGTTTTTCATTTTATTATTACATGTTTGTGCGCGATAATGAATTTCCAGAGGACGAAGAAAGAAGAAGAAGAAGAAGAAGGAGAAGGAGAAAAAGAAGAAGAAGAATGGAGCAAATATTGGTTGATGATGGTCTAGAATCAGACTTTGAAGAAGCAAATGGCGTTGAGCAAAATTCGGCAACTAACCAAGGGCCAGAGGTTCCCGAAGAGGATAAGGAAATTGAGATGGAGCAAATATCAGAGCATGATCATGAAATAGAGCCAATTTCAGAACATGCAACGAGAGAAGAACATTTGACAACAATCTTTGAAGGAGATTCCAATCTCCAGAACAACGGAGTACTTGTTGTAGTAGTAGAAAGTAACGAAGCATAA 1983 0.4054 MMKFHKLLKLQPAPFFMLGLLISYNSMDNWLNSTMMDYLTESLNSERGSAMVRNMQDGLSCLFVVIAYLMSEAYTGSFTAISFCASASTMGSMLFWISSMSDREYFEYYMVTVAIALLTMGNIAGKCLSQDFFDSHLEETARAKKEELGQQCTNNNARLYGISFAWTISLFFCSFGAVFICSVVAGDNPWHGIRFVSPFMVGSYMLFYFGYAWYNHEDLLPESNVGKFCRVCKAAYRKRILAYLTXEDGYYWKNYKQGHLYEANHGQDRVVRLLPRVPRGFGWLEKAAIIDKKQTENDDVSPHMQETKGELCTVKQVREAKSIVLLLCWGFCLFPYSFVAASGNTFFVSQASSLKIFMLIDISYLFLLKTTMTGMVIPMLFLILEEPNVAKKISKIIIKFGANRKIIDSTTVNIGIGMFLAAICCVFAWSVENHILYSTGIMSTKALIPQFLLLGMAEGLVEGQDGLSRLFENYASESVRNFAEPFSNLVIGLGKLLSIPWFLIFDRWLYESNNTAGRHLDKYFLMLAILNIVSLIGFSFYYYMFVRDNEFPEDEERRRRRRRRRRKRRRRMEQILVDDGLESDFEEANGVEQNSATNQGPEVPEEDKEIEMEQISEHDHEIEPISEHATREEHLTTIFEGDSNLQNNGVLVVVVESNEA* 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2243 660 Gene3D MFS general substrate transporter like domains 15 551 IPR036259 -
Amo12g2243 660 MobiDBLite consensus disorder prediction 587 642 - -
Amo12g2243 660 Pfam POT family 167 461 IPR000109 GO:0016020|GO:0022857|GO:0055085
Amo12g2243 660 PANTHER PROTEIN NRT1/ PTR FAMILY 5.6-LIKE 35 547 - -
Amo12g2243 660 MobiDBLite consensus disorder prediction 611 638 - -
Amo12g2243 660 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 35 547 IPR000109 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2243 Amo-Chr12 102314518 102319544 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g2243 31 559 Organic Solute Cotransporters AT3G54450 23.466 1.38e-16 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2243 - K14638 aip:107628464 1289.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g2243 12 102314518 102319544 Amo02g2479 02 78338373 78339702 hybridization