Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g2479 ATGCTAGGGAGCTATCTGTTGTTCTACTTTGGATATGCGTGGTACAACCATGAAGATTTGCTTCCTGAAAGCAATGTTGGCAAGTTTTGTAGAGTGTGCAAAGCAGCTTATAGGAAAAGGGATTTGGCATATTTAACCTCAGAAGATGGATACTACTGGAAGAATTATAGGCAGGGACATTTCTATGAGGCTAACCATGGGCAAGACCGGGTTGTAAGGTTGTTACCGCGAGTACCTTGGGGGTTTGGATGGTTGGAAAAAGCAGCTATAATTGACCAGAAACAAACTGAGAATTATGATGTTAGTCCCCATATGCAAGAGACGAAAGGGGAGCTTTGCACAGTTAAGCAAGTTAGAGAAGCCAAGAGCATTGTTTTGTTGCTCTGTTGGGGGTTTTGCTTATTCCCTTACAGTTTTGTTACGGCTTCTGGGAACACTTTTTTTGTTTCTCAAGCCAGTAGCATGGAAATAAAAGCTAAAATAGCTAAGAAGATCAATAAGATGGCCATCATCTACTTTGGAGCCAAGAGAAAAATAATAGATTCAACGACCATGAAGATTGGTATTGGAATATTTCTTGCTGTAATTTGTTGTGTCTTTGCATGGAAAGTGGAAAATCATAGACTATATTCGATAGGAATGATGAATACAAAAGCTTTGATTCCACAATTTTTGTTGTTAGGAATGGCAGAAGCGCTTGTTGAAGACGGTTTATCCCAGCTCTTCGAGATCTATGCATCAGAATCTGTGAGAAACTTTGCTGAGCCATTTAGTAATATAGTGATTGGTATAGGAAAACTCCTAAGTATACCATGGTTCTTGATGTTCAGCTGCTGGATTAATGAATCAATCAACACCAGCCATTTGGATAGATATTTTCTTATGCTAGCAATACTCAATTTTGTGCTCCTTCTCTTTGTTTTAGTTTACTATTACATGTTTGGGAACGACCATGATTTTCTGGAGGACGAAGAAGAAATGATGGAGCAAATATCGGAGGATCATGGTCTAGAATCAGACTTAGAAGAAGCAAACGGCCTTGAGCGAAATTCCACAACTAGCCAAGGGCCAGAGATTCCCAATGAGGATAAGGAAATTGAGATGGAAAGATTAGGGCATAATCATGAAATAGACTCACCTGAAGAACATGCAAAAGAAGAACATTTGACAGTGATCTTTGAAGGGGATTTCGACCACCAAAACAACGGAGTGCTTGTCGCTGTAGTCGAAAGTAATGAACCATAA 1245 0.3952 MLGSYLLFYFGYAWYNHEDLLPESNVGKFCRVCKAAYRKRDLAYLTSEDGYYWKNYRQGHFYEANHGQDRVVRLLPRVPWGFGWLEKAAIIDQKQTENYDVSPHMQETKGELCTVKQVREAKSIVLLLCWGFCLFPYSFVTASGNTFFVSQASSMEIKAKIAKKINKMAIIYFGAKRKIIDSTTMKIGIGIFLAVICCVFAWKVENHRLYSIGMMNTKALIPQFLLLGMAEALVEDGLSQLFEIYASESVRNFAEPFSNIVIGIGKLLSIPWFLMFSCWINESINTSHLDRYFLMLAILNFVLLLFVLVYYYMFGNDHDFLEDEEEMMEQISEDHGLESDLEEANGLERNSTTSQGPEIPNEDKEIEMERLGHNHEIDSPEEHAKEEHLTVIFEGDFDHQNNGVLVAVVESNEP* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g2479 414 Gene3D MFS general substrate transporter like domains 1 320 IPR036259 -
Amo02g2479 414 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 4 316 IPR000109 GO:0016020|GO:0022857|GO:0055085
Amo02g2479 414 Pfam POT family 4 253 IPR000109 GO:0016020|GO:0022857|GO:0055085
Amo02g2479 414 PANTHER PROTEIN NRT1/ PTR FAMILY 5.6-LIKE 4 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g2479 Amo-Chr2 78338373 78339702 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g2479 29 330 Organic Solute Cotransporters AT3G54450 25.072 1.51e-15 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g2479 - K14638 aip:107628464 593.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g2243 12 102314518 102319544 Amo02g2479 02 78338373 78339702 hybridization