Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2240 ATGATGAAGTTTCACAAGTTACTGAAGCCACAACCAGCTCCATTTTTCATGTTAGGTTTGTTAATAAGCTACAACTTCATGGAAAATTGGCTGAATTCTACGATGATGGACTATCTCACAGAGTCACTGATGAATAGTGAAAGGGATAGTGTTATAATTAGAAATATGCAAGATGGCTTGTCATGTCTATTTGTTGTTATTGCTCATCTAATCTCAGAAGCCTACACCGGCAATTTCATTGCAATAACTTTTTGTGCAAGTGCCTCCGCCATGGGTTCAATGTTGTTCTGGATATCTTCAATGTCAGATCGCAAGTACTTCGAATATTATATGGTCACTGTAGCAATTGCTCTTCTTACAATGGGAAACATCGCCGGTAAATGTTTGTCCCAAGATTTTTTCGACTCTCATTTGGAGGAGATAGCGAGAGCTAAAAAAGAAGAGTTAGGACAACAATGCACAAACAACAATGCAAGGCTATACGGTATCTCTTTTGCGTGGACGATCTCTCTATTTTTTTGTTCGTTTGGCGCAGTCGTTATTTGCTCTGTAGTTGCTGGTGATAATCCGTGGCACGGCATTAGATTTGTGTCACCATTCATGGTAGGGAGCTATATGTTGTTCTACTTTGGATATGCATGGTACAAACATGAAGATTTGCTTGTGGAAAAAAGCAATGTTGGCAAGTTTTGTAGAGTGTGCAAAGCAGCTTATAGGAAAAGGATTTTGGCATATTTAACCACAGAAGATGGATATTACTGGAAGAATTATAAGCAGGGACATCTCTATGAGGCTAACCATGGCCAAGACCGGGTTGTAAGGTTGTTACCGCGAGTACCTTGGGGGTTTGGATGGTTGGAAAAAGCAGCTATAATTGACAAGAAACAAACTGAAAATCATGATGTTAGTCCCCATATGCAAGAGACGAAAGGGGAGCTTTGCACAGTTAAGCAAGTTAGAGAAGCCAAGAGCATTGTTTTGTTGCTCTGTTGGGGGTTTTGCTTATTCCCTTACAGTTTTGTTGCGGCTTCTGGGAACACTTTTTTTGTTTCACAAGCGAGCAGTTTGAAAAGTTTCATGCATATTGACATTTCATCTCTCTTCTTACTCAAGACCACCATGACTGACATGGTAATACCAATGCTTTTCCGGATAGTGGAAGAACCTAATGTGGCTAAGAAGATCAGCAAGATCATCATCAAATTTGGAGCCAATAGAAAAATAATAGATTCAACGACCGTGAAGATTGGTATTGGAATGTTTCTTGCTGCGATTTGTTGTGTCTTCGCATGGAGAGTGGAAAATCATATACTGTATTCGACAGGAATTATGAGTACAAAGGCCTTGATTCCACAATTTCTGTTGTTAGGAATGGCGGAAGCGCTTGTTGAAGGCGGTCTATCCAAGTTATTCGAGAACTACGCATCAGAATCTGTGAGGAACTTTGCTGAGCCATTCAGTAATCTGGTGAATGGTTTAGGAAAACTCTTGAGCATACCATGGTTCTTGATTTTCGACAGGTGGCTTTATGAATCAAACAACACCGCCAGCCGCCATTTGGACAGATATTTTCTCATGTTAGCAATACTCAATATTGTGTTTCTTCTCGGTTTTTTAGTTTATTATTACATGTTTGTGCACGATAATGAATTTCCGGAGGACGAAGAAGAAGAAACAATGATGGAGCAAATATTGGTTGATGATGGTCTAGAATCAGACTTTGAAGAAGCAAATGGCGTTGAGCCAAATTCGGCAACTAGCCCAGGGCCAGACGTTACCGAAGAGGATAAGGAAATTGAGATGGAGCAAATATCAGAGCATGATCATGAAATAGAGTCAATTTGA 1845 0.4 MMKFHKLLKPQPAPFFMLGLLISYNFMENWLNSTMMDYLTESLMNSERDSVIIRNMQDGLSCLFVVIAHLISEAYTGNFIAITFCASASAMGSMLFWISSMSDRKYFEYYMVTVAIALLTMGNIAGKCLSQDFFDSHLEEIARAKKEELGQQCTNNNARLYGISFAWTISLFFCSFGAVVICSVVAGDNPWHGIRFVSPFMVGSYMLFYFGYAWYKHEDLLVEKSNVGKFCRVCKAAYRKRILAYLTTEDGYYWKNYKQGHLYEANHGQDRVVRLLPRVPWGFGWLEKAAIIDKKQTENHDVSPHMQETKGELCTVKQVREAKSIVLLLCWGFCLFPYSFVAASGNTFFVSQASSLKSFMHIDISSLFLLKTTMTDMVIPMLFRIVEEPNVAKKISKIIIKFGANRKIIDSTTVKIGIGMFLAAICCVFAWRVENHILYSTGIMSTKALIPQFLLLGMAEALVEGGLSKLFENYASESVRNFAEPFSNLVNGLGKLLSIPWFLIFDRWLYESNNTASRHLDRYFLMLAILNIVFLLGFLVYYYMFVHDNEFPEDEEEETMMEQILVDDGLESDFEEANGVEPNSATSPGPDVTEEDKEIEMEQISEHDHEIESI* 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2240 614 Coils Coil 597 614 - -
Amo12g2240 614 Pfam POT family 169 498 IPR000109 GO:0016020|GO:0022857|GO:0055085
Amo12g2240 614 Gene3D MFS general substrate transporter like domains 8 551 IPR036259 -
Amo12g2240 614 MobiDBLite consensus disorder prediction 600 614 - -
Amo12g2240 614 PANTHER PROTEIN NRT1/ PTR FAMILY 5.6-LIKE 37 547 - -
Amo12g2240 614 MobiDBLite consensus disorder prediction 575 614 - -
Amo12g2240 614 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 37 547 IPR000109 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2240 Amo-Chr12 102215668 102220370 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g2240 13 559 Organic Solute Cotransporters AT3G54450 22.942 5.41e-19 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2240 - K14638 aip:107628464 1098.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g2240 12 102215668 102220370 Amo12g2240 12 102215668 102220370 ECH
Amo12g2240 12 102215668 102220370 Amo02g2475 02 78311715 78316480 hybridization