Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g2475 ATGATGAAGTTTCACAAGTTACTGAAGCCACAACCAGCTCCATTTTTCATGTTAGGTTTGCTGATAAGCTACAACCTCATGGAAAATTGGCTAAATTCTACGATGATGGACTATCTCAAAGAGTCAATGAATAGTGAAAGGGGTAGTACTATGGTTAGAAATATGCAAGATGGCTTGTCATGTTTGTTTGTCGTGATTGCTTATCTAATGTCAGAAGCCTACACCGGCAGTTTCACTGCAATAAGTTTTTGTGCAAGTGCCTCCACCATGGGTTCAATGTTGTTCTGGATATCTTCAATGTCAGATCGCAAGTACTTCGAATATTATATGGTCATTGTAGCAATTGCTCTTCTTACAATGGGAAACATCGCCGGTAAATGTTTGTCCCAAGATTTTTTCGACTCTCATTTGGAGGAGATAGCGAGAGCTAAAAAAGAAGAGTTAGGACAACAAAGCATAAACAACAATGCAAGGCTATACTATATCTCTTTTGCGTGGACGATCTTTCTATGTTTTTGTTCGTTTGGCGCAGTCGTTATTTGCTCTGTAGTTGCTGGTGATAATCCGTGGCACGGCATTAGATTTGTGTCACCATTCATGGTAGGGAGCTATATGTTGTTCTACTTTGGATATGCATGGTACAAACATGAAGATTTGCTTGTGGAAAAAAGCAATGTTGGCAAGTTTTGTAGAGTGTGCAAAGCAGCTTATAGGAAAAGGATTTTGGCATATTTAACCACAGAAGATGGATATTACTGGAAGAATTATAAGCAGGGACATCTCTATGAGGCTAACCATGGCCAAGACCGGGTTGTAAGGTTGTTACCGCGAGTACCTTGGGGGTTTGGATGGTTGGAAAAAGCAGCTATAATTGACAAGAAACAAACTGAAAATCATGATGTTAGTCCCCATATGCAAGAGACGAAAGGGGAGCTTTGCACAGTTAAGCAAGTTAGAGAAGCCAAGAGCATTGTTTTGTTGCTCTGTTGGGGGTTTTGCTTATTCCCTTACAGTTTTGTTGCGGCTTCTGGGAACACTTTTTTTGTTTCACAAGCGAGCAGTTTGAAAAGTTTCATGCATATTGACATTTCATCTCTCTTCTTACTCAAGACCACCATGACTGACATGGTAATACCAATGCTTTTCCGGATAGTGGAAGAACCTAATGTGGCTAAGAAGATCAGCAAGATCATCATCAAATTTGGAGCCAATAGAAAAATAATAGATTCAACGACCGTGAAGATTGGTATTGGAATGTTTCTTGCTGCGATTTGTTGTGTCTTCGCATGGAGAGTGGAAAATCATATACTGTATTCGACAGGAATTATGAGTACAAAGGCCTTGATTCCACAATTTCTGTTGTTAGGAATGGCGGAAGCGCTTGTTGAAGGCGGTCTATCCAAGTTATTCGAGAACTATGCATCAAAATCTGTTAGTAACTTTGCTGAGCCATTCAGTAATCTGGTGAATGGTTTAGGAAAACTCTTGAGCATACCATGGTTCTTGATTTTCGACAGGTGGCTTTATGAATCAAACAACACCGCCAGCCGCCATTTGGACAGATATTTTCTCATGTTAGCAATACTCAATATTGTGTCTCTTATCGAATCAGACTTTGAAGAAGCAAATGGCGTTGAGCAAAATTCGGCAACTAACCAAGGGCCAGAGGTTCCCGAAGAGGATAAGGAAATTGAGATGGAGCAAATATCAGAGCATGATCATGAAATAGAGCCAATTTCAGAACATGCAACGAGAGAAGAACATTTGACAACAATCTTTGAAGGAGATTCCAATCTCCAGAACAACGGAGTACTTGTTGTAGTAGTAGAAAGTAACGAAGCATAA 1845 0.4 MMKFHKLLKPQPAPFFMLGLLISYNLMENWLNSTMMDYLKESMNSERGSTMVRNMQDGLSCLFVVIAYLMSEAYTGSFTAISFCASASTMGSMLFWISSMSDRKYFEYYMVIVAIALLTMGNIAGKCLSQDFFDSHLEEIARAKKEELGQQSINNNARLYYISFAWTIFLCFCSFGAVVICSVVAGDNPWHGIRFVSPFMVGSYMLFYFGYAWYKHEDLLVEKSNVGKFCRVCKAAYRKRILAYLTTEDGYYWKNYKQGHLYEANHGQDRVVRLLPRVPWGFGWLEKAAIIDKKQTENHDVSPHMQETKGELCTVKQVREAKSIVLLLCWGFCLFPYSFVAASGNTFFVSQASSLKSFMHIDISSLFLLKTTMTDMVIPMLFRIVEEPNVAKKISKIIIKFGANRKIIDSTTVKIGIGMFLAAICCVFAWRVENHILYSTGIMSTKALIPQFLLLGMAEALVEGGLSKLFENYASKSVSNFAEPFSNLVNGLGKLLSIPWFLIFDRWLYESNNTASRHLDRYFLMLAILNIVSLIESDFEEANGVEQNSATNQGPEVPEEDKEIEMEQISEHDHEIEPISEHATREEHLTTIFEGDSNLQNNGVLVVVVESNEA* 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g2475 614 Pfam POT family 85 497 IPR000109 GO:0016020|GO:0022857|GO:0055085
Amo02g2475 614 Gene3D MFS general substrate transporter like domains 11 536 IPR036259 -
Amo02g2475 614 MobiDBLite consensus disorder prediction 545 571 - -
Amo02g2475 614 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 36 531 IPR000109 GO:0016020|GO:0022857|GO:0055085
Amo02g2475 614 PANTHER PROTEIN NRT1/ PTR FAMILY 5.6-LIKE 36 531 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g2475 Amo-Chr2 78311715 78316480 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g2475 31 534 Organic Solute Cotransporters AT3G54450 22.642 2.18e-15 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g2475 - K14638 aip:107628464 1113.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g2240 12 102215668 102220370 Amo02g2475 02 78311715 78316480 hybridization