Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2075 ATGGCAACTTCAGCTGTTGGAGCCATCAACTTGCTACCGTTGAAACTGAGTGGATCAAGCAGTGGTGCACCTCCAACAACAAACTCAGCATTCTTTGGAACCAGCTTGAAGAGAGTGAGTTCTGTAGTTTCAAACCAGAGGAATTTGTCTGGCGGGAACTTTAAGGTTTGCGCTGGAATCGAATACGATGAGGAGAAGCAGACGTCGAAGGACAGATGGGGTGGACTTGCCTATGACACTTCAGATGATCAACAAGATATCACAAGAGGAAAAGGAATGGTGGACTCTCTCTTCCAAAACACCATGGATAGTGGCACTCACTATGCTGTCATGAGTTCTTATGATTACATCAGTACCGGTCTTCGCCAGTACAATTTGGACAACACCATCGATGGTTTCTATATTGCTCCTGCATTCATGGACAAGGTTGTAGTTCACATCACCAAGAACTTTTTGAACTTGCCAAATATTAAAGTTCCTCTTATTTTGGGAATTTGGGGTGGCAAAGGTCAAGGGAAGTCTTTTCAATGTGAACTTGTCTTTGCCAAGATGGGAATCAACCCTATAATGATGAGTGCTGGAGAATTGGAAAGTGGAAATGCCGGAGAGCCTGCAAAGTTGATCAGGCAAAGGTATCGCGAGGCGGCGGACATAATTAAGAAAGGAAAGATGTGCTGCCTCTTCATCAATGATCTTGATGCAGGGGCTGGTAGAATGGGTGGAACAACCCAATACACAGTTAACAACCAAATGGTAAATGCCACACTCATGAACATTGCTGATAACCCAACCAATGTTCAACTTCCTGGTATGTACAACAAGGAGGAGAATCCGCGTGTCCCCGTCATTGTCACCGGTAATGACTTCTCAACATTGTATGCTCCTCTCATTCGCGACGGACGTATGGAGAAATTCTATTGGGCGCCGACTCGAGAAGACCGGATTGGTGTCTGCCAAGGTATTTTCAGGACAGATAATGTTCCCAAAGAGGACATTGTAAGGCTTGTTGACACCTTCCCTGGTCAATCTATTGACTTCTTTGGTGCCGTGAGGGCTAGAGTGTATGATGATGAAGTCAGGAATTGGATCTCTAGTGTTGGGGTGGAAAGCATTGGGAAAAGGCTTGTGAACTCAAAGGAGGGACCTCCAGTTTTCGAGCAACCGAAGATGACAATCGAGAAGCTTCTCGAGTACGGAAACATGCTTGTCCAAGAGCAAGAGAATGTCAAGAGGGTTCAATTGGCTGACAAGTACCTCAATGAGGCAGCTCTTGGAGAAGAAAATGAAGATGCCATAAAAACCGGAAACTTCTATGGAAAAGGAGCTCAACAGGTTCATATTCCCATCCCTGAAGGTTGCACTGACCCTGTTGCAGAAAACTATGATCCAACAGCCAGAAGTGATGATGGAAGCTGCACATACAAATTTTAG 1431 0.4514 MATSAVGAINLLPLKLSGSSSGAPPTTNSAFFGTSLKRVSSVVSNQRNLSGGNFKVCAGIEYDEEKQTSKDRWGGLAYDTSDDQQDITRGKGMVDSLFQNTMDSGTHYAVMSSYDYISTGLRQYNLDNTIDGFYIAPAFMDKVVVHITKNFLNLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPVIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCQGIFRTDNVPKEDIVRLVDTFPGQSIDFFGAVRARVYDDEVRNWISSVGVESIGKRLVNSKEGPPVFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADKYLNEAALGEENEDAIKTGNFYGKGAQQVHIPIPEGCTDPVAENYDPTARSDDGSCTYKF* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2075 476 Pfam ATPase family associated with various cellular activities (AAA) 165 306 IPR003959 GO:0005524|GO:0016887
Amo12g2075 476 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 129 336 IPR027417 -
Amo12g2075 476 PANTHER - 3 475 IPR044960 -
Amo12g2075 476 PANTHER RIBULOSE BISPHOSPHATE CARBOXYLASE/OXYGENASE ACTIVASE, CHLOROPLASTIC-LIKE ISOFORM X1 3 475 - -
Amo12g2075 476 Gene3D - 125 309 IPR027417 -
Amo12g2075 476 Gene3D - 310 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2075 Amo-Chr12 97092003 97096285 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2075 - - gmx:100795298 846.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g2075 12 97092003 97096285 Amo02g2273 02 74134866 74139272 hybridization