Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g2273 ATGGCAACTTCAGCTGTTGGAGCCATCAACTTGCTACCGTTGCAGTTGAAACTGAGTGGATCAAGCAGTGGTGCACCTCCAACAACAAACTCAGCATTCTTTGGAACCAGCTTGAAGAGAGTGAGTTCTGTAGTTTCAAACCAGAGGAATTTGTCTGGCGGGAACTTTAAGGTTTGCGCCGGAATCGAATACGATGAGGAGAAGCAGACWSCGAAGGACAGATGGYGTGGACTTGCCTATGACACTTCAGATGATCAACAAGATATCACAAGAGGAAAAGGAATGGTGGACTCTCTCTTCCAAYKCKCCATGGATAGTGGCACTCACTATGCTGTCATGAGTTCTTATGATTACATCAGTACCGGTCTTCGCCAGTACAATTTGGACAACACCATTGATGGTTTCTATATTGCTCCTGCATTCATGGACAAGGTTGTAGTTCACATCACCAAGAACTTTTTGAACTTGCCAAATATTAAAGTTCCTCTTATTTTGGGAATTTGGGGTGGCAAAGGTCAAGGGAAGTCTTTTCAATGTGAACTTGTWTTTGCCAAGATGGGAATCAACCCTATAATGATGAGTGCTGGAGAATTGGAAAGTGGAAATGCCGGAGAGCCTGCAAAGTTGATCAGGCAAAGGTATCGCGAGGCGGCGGACATAATTAAGAAAGGAAAGATGTGCTGCCTCTTCATCAATGATCTTGATGCAGGGGCTGGTAGYATGGGTGGAACAACCCAATACACAGTTAACAACCAAATGGTAAATGCCACACTCATGAACATTGCTGATAACCCAACCAATGTTCAACTTCCTGGTATGTACAACAAGGAGGAGAATCCGCGTGTCCCCYTCATTGTCACCGGTAATGACTTCTCAACATTGTATGCTCCTCTCATTCGCGACGGACGTATGGAGAAATTCTATTGGGCGCCGACTCGAGAAGACCGGATTGGTGTCTGCCAAGGTATTTTCAGGACAGATAATGTTCCCAAAGAGGACATTGTAAGGCTTGTTGATACCTTCCCTGGTCAATCTATTGACTTCTTTGGTGCCTTGAGGGCTAGAGTGTATGATGATGAAGTCAGGACTTGGATCTCTAGTGTTGGGGTGGAAAGCATTGGGAAAAGGCTTGTGAACTCAAAGGAGGGACCTCCAGTTTTCGAGCAACCGAAGATGACAATCGAGAAGCTTCTCGAGTACGGAAACATGCTTGTCCAAGAGCAAGAGAATGTCAAGAGGGTTCAATTGGCTGACAAGTACCTCAATGAGGCAGCTCTTGGAGAAGAAAATGAAGATGCCATAAAAACCGGAAACTTCTATGGAAAAGGAGCTCAACAGGTTCATATTCCCATCCCTGAAGGTTGCACTGACCCTGTTGCAGAAAACTATGATCCAACAGCCAGAAGTGATGATGGAAGCTGCACATACAAATTTTAG 1437 0.4482 MATSAVGAINLLPLQLKLSGSSSGAPPTTNSAFFGTSLKRVSSVVSNQRNLSGGNFKVCAGIEYDEEKQTXKDRWXGLAYDTSDDQQDITRGKGMVDSLFQXXMDSGTHYAVMSSYDYISTGLRQYNLDNTIDGFYIAPAFMDKVVVHITKNFLNLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGSMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPXIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCQGIFRTDNVPKEDIVRLVDTFPGQSIDFFGALRARVYDDEVRTWISSVGVESIGKRLVNSKEGPPVFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADKYLNEAALGEENEDAIKTGNFYGKGAQQVHIPIPEGCTDPVAENYDPTARSDDGSCTYKF* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g2273 478 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 131 337 IPR027417 -
Amo02g2273 478 Gene3D - 127 311 IPR027417 -
Amo02g2273 478 Gene3D - 312 424 - -
Amo02g2273 478 Pfam ATPase family associated with various cellular activities (AAA) 167 308 IPR003959 GO:0005524|GO:0016887
Amo02g2273 478 PANTHER - 3 477 IPR044960 -
Amo02g2273 478 PANTHER RIBULOSE BISPHOSPHATE CARBOXYLASE/OXYGENASE ACTIVASE, CHLOROPLASTIC-LIKE ISOFORM X1 3 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g2273 Amo-Chr2 74134866 74139272 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g2273 - - gmx:100795298 839.721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g2075 12 97092003 97096285 Amo02g2273 02 74134866 74139272 hybridization