Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g0783 ATGAGCATGTCTTCAAGCAACAAGGTCAAAGGACTTCTTAAAGGCCTTAGATACATTTCTCAAATGTTTGAAACGGATGCTACTAAAGAGAAAGAAATACAAATTGGATATCCCACAGATGTAAAGCATGTGGCCCATATAGGATATGATGGTCCCTCTGTGAATTCTCCTAGCTGGATGAATGAGTTCAAACATTCTTCTCCAAGGTCGGCGTCATCACCTCTTGTTCCCAGCGATCTTCAAAATAGAGAACAGGATAATTCAACCAACTTCGAAGATAAAGTGACAAAGAAAAAGGAATCAAAAGAATCTCCTACAAAGGAGAAATCATCAGACAGGCCTAGACAATCAAGGAGGTCTTCTAAGTCCAAGGAATCTCCTTCTAATGGGCTTATTCTGGCCCAACAAGCAGATGTAGAGTCACCAAGAAGTGGCCCACAAGACATTCCCAAGAAAGGTAGAACAAGGAAGTCAAAAGATGCTAGTGGGTCCACTAGGCCCAGGACCAAGGACCAATCTTCAGAATCAAGTAACTTGAATTTTGACTCAACACCCAAGTCTAGGAGCAAGCAGAGGCACATTGAAGAAAATGAGCAAATATGA 603 0.4163 MSMSSSNKVKGLLKGLRYISQMFETDATKEKEIQIGYPTDVKHVAHIGYDGPSVNSPSWMNEFKHSSPRSASSPLVPSDLQNREQDNSTNFEDKVTKKKESKESPTKEKSSDRPRQSRRSSKSKESPSNGLILAQQADVESPRSGPQDIPKKGRTRKSKDASGSTRPRTKDQSSESSNLNFDSTPKSRSKQRHIEENEQI* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g0783 200 MobiDBLite consensus disorder prediction 54 85 - -
Amo12g0783 200 PANTHER CRIB DOMAIN-CONTAINING PROTEIN RIC7-LIKE ISOFORM X1 9 177 - -
Amo12g0783 200 PANTHER CRIB DOMAIN-CONTAINING PROTEIN RIC8 9 177 IPR044510 -
Amo12g0783 200 MobiDBLite consensus disorder prediction 186 200 - -
Amo12g0783 200 MobiDBLite consensus disorder prediction 167 185 - -
Amo12g0783 200 CDD CRIB 33 68 - -
Amo12g0783 200 MobiDBLite consensus disorder prediction 48 200 - -
Amo12g0783 200 SMART PBD_5 35 66 IPR000095 -
Amo12g0783 200 MobiDBLite consensus disorder prediction 145 166 - -
Amo12g0783 200 MobiDBLite consensus disorder prediction 86 122 - -
Amo12g0783 200 ProSiteProfiles CRIB domain profile. 35 48 IPR000095 -
Amo12g0783 200 Pfam P21-Rho-binding domain 34 99 IPR000095 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g0783 Amo-Chr12 16867667 16870408 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g0783 - - aip:107626927 357.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo06g0284 06 3851632 3854056 Amo12g0783 12 16867667 16870408 PCT
Amo12g0783 12 16867667 16870408 Amo06g0284 06 3851632 3854056 PCT