Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0284 ATGTCCAACAATTGCAAGGTGAAGGGGATTCTAAGAGGGATTAGATTCATTTCTCAGATATTTGAAAGTGATAAAGAACAAGAAATTGAGATTGGTCATCCCACAGATGTGAAGCATGTGGCCCACATCGGGTGGCAGGGTCCTTCGGCTGAAAATAATCCTAGCTGGATGAACGAGTTTAAATCTGTTCATGGACTTTCAGCATCAGCACCTCTAAGTCTTCATGGAGACATTCATAGCCAAGGAGATGAATATTCCGACGATTCAATAAAAAGAGGTTCAAGGAGGCAATCAATGGGAAACATGAGAGAATCTCATGCAAAGGAAAAATCAGACAGGCCAAAGAATCCAAAAACTAGGTCATCCAAATCAAAGGAATCATCATCATGCAATAATAATGAATCCACCCAACCATCAAATGACATGGACTCTATCCAACAACAAATCCAAGGTTGTAGTAGTGACTTAAATTTGCAGCCACCTAGGAACAACCTATTACCAGATGTTCCTAAACTTAAAGTTAAAGATGCTTCTTCCAACGCTGGTTCTACCTCAACCAAGTCAAGATCATCATCAAGAGCACAAAGAAATTTGAACAAAGAAATCTCTTCTAGATCAGGCCACAAAGCTAGAAAGAAACATAGACATTTTGAAGAAGATCAATCAGAATCAGAACAAGACCAAGACCAAGAAGGATCTGACAAAATCCTCTGGACAAATTAG 723 0.3928 MSNNCKVKGILRGIRFISQIFESDKEQEIEIGHPTDVKHVAHIGWQGPSAENNPSWMNEFKSVHGLSASAPLSLHGDIHSQGDEYSDDSIKRGSRRQSMGNMRESHAKEKSDRPKNPKTRSSKSKESSSCNNNESTQPSNDMDSIQQQIQGCSSDLNLQPPRNNLLPDVPKLKVKDASSNAGSTSTKSRSSSRAQRNLNKEISSRSGHKARKKHRHFEEDQSESEQDQDQEGSDKILWTN* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0284 240 MobiDBLite consensus disorder prediction 80 122 - -
Amo06g0284 240 PANTHER CRIB DOMAIN-CONTAINING PROTEIN RIC7-LIKE ISOFORM X1 7 195 - -
Amo06g0284 240 MobiDBLite consensus disorder prediction 177 201 - -
Amo06g0284 240 Gene3D CRIB domain 24 70 IPR036936 -
Amo06g0284 240 PANTHER CRIB DOMAIN-CONTAINING PROTEIN RIC8 7 195 IPR044510 -
Amo06g0284 240 MobiDBLite consensus disorder prediction 74 240 - -
Amo06g0284 240 ProSiteProfiles CRIB domain profile. 31 44 IPR000095 -
Amo06g0284 240 MobiDBLite consensus disorder prediction 123 161 - -
Amo06g0284 240 CDD CRIB 29 67 - -
Amo06g0284 240 MobiDBLite consensus disorder prediction 213 232 - -
Amo06g0284 240 Pfam P21-Rho-binding domain 30 62 IPR000095 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0284 Amo-Chr6 3851632 3854056 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0284 - - aip:110263241 399.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo06g0284 06 3851632 3854056 Amo12g0783 12 16867667 16870408 PCT
Amo12g0783 12 16867667 16870408 Amo06g0284 06 3851632 3854056 PCT