Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g0488 ATGGAGGCAAAGCAACATGCGTGCACACTAGAGATCACTGTTATCTCCGGTGAAAACATATGTGTTGATCGAACTCCAATTGCTGAGAACATCTTTGTAACCGTTCGTGCCGAGTCTCTGAATTGTTGCACAACCAAAATGGTAAGCGAAAATGGTGGCATATTTGCATGGAACGAGAAATTCATGTTGGATATTCCCATGCATGCTAGGTCAATCACATTTGAAGTCCAATGCAAGAAATACAAGGCGGCGCGACCCGTTGGGGTGGCCAGAATTGGGGTTTTGGATGTTCTTTTTTGTCGAAATATTTCGAATGCAACTGAAAATAATGACGATGGCGTTCAAATGTTGAGTTATGAGTTGAGGGGTTGGGATGGGAGGAGAAATGGGGTTATCCATTTCTCGGTTAGGGTGGTGGTGCCGCCGCCGGAGGATTGGCCGGCGAGTTACGAAATCAAACAAGCAAAGGAAGAAATGAAGATGAGTTCTAGTGGATTATTTGAGCATGACCAAGTTATGGAGTCTAAAATTAGATAA 537 0.4395 MEAKQHACTLEITVISGENICVDRTPIAENIFVTVRAESLNCCTTKMVSENGGIFAWNEKFMLDIPMHARSITFEVQCKKYKAARPVGVARIGVLDVLFCRNISNATENNDDGVQMLSYELRGWDGRRNGVIHFSVRVVVPPPEDWPASYEIKQAKEEMKMSSSGLFEHDQVMESKIR* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g0488 178 PANTHER C2 DOMAIN PROTEIN 6 171 - -
Amo12g0488 178 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 9 144 IPR035892 -
Amo12g0488 178 Pfam C2 domain 9 96 IPR000008 -
Amo12g0488 178 PANTHER INGRESSION PROTEIN FIC1 6 171 - -
Amo12g0488 178 Gene3D C2 domain 7 138 IPR035892 -
Amo12g0488 178 SMART C2_3c 9 106 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g0488 Amo-Chr12 7780365 7782236 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g0488 - - adu:107473352 350.517
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g0488 12 7780365 7782236 Amo02g0603 02 7862390 7865574 hybridization