Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g0603 ATGGATTCTATCGAAACGAAACCAAGAACCCTCGAGCTGACGGTGCTTTCCGCCGAGAACCTCCGCGTGAACGGAAAACCCGCCACCAAGAACGTGTTCGTGGTGGTACGCGCCGAATCCCTAACCGCCCACACGACGTCGTGTAAAGGAAACGGCAGCAACTCCAACGGCTTTGTCTCGTGGAACGAGAAGTTTGTTGTGGAAGTTGCGGCACACGCGCGTAGCATCGCGTTTGAGGTGAAGTGCAAGACGTCCCCCACGGGATCCGTTAGGGACGTTGGGGTTGCCAGGGTGGCACTATCTGATTTCCTGGGAACCATTGTACCTGATCACTGCCTTCAGTTCTTGTGTTACCGGTTAAGGGATTGGGATGGCTTGAAGAATGGCGTTATTAATTTCTCCGTTAGGGATTTGACCGCTGCTCCGCCGCTTGGGAAGGTGGTTGGTGGTGGCTGTGACGGTTTTCATGGGTTCCAAGAGGTGGTTGGTGTAAAGAGTGAGTGTTGTTCTTCTTCATCTGCTTCTGATAATGCGGTTGTTACTGGCATTCCTGTTTGGTGGAGAAACAACATCTGA 576 0.526 MDSIETKPRTLELTVLSAENLRVNGKPATKNVFVVVRAESLTAHTTSCKGNGSNSNGFVSWNEKFVVEVAAHARSIAFEVKCKTSPTGSVRDVGVARVALSDFLGTIVPDHCLQFLCYRLRDWDGLKNGVINFSVRDLTAAPPLGKVVGGGCDGFHGFQEVVGVKSECCSSSSASDNAVVTGIPVWWRNNI* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g0603 191 Pfam C2 domain 10 102 IPR000008 -
Amo02g0603 191 Gene3D C2 domain 9 136 IPR035892 -
Amo02g0603 191 ProSiteProfiles C2 domain profile. 1 113 IPR000008 -
Amo02g0603 191 SMART C2_3c 10 112 IPR000008 -
Amo02g0603 191 PANTHER INGRESSION PROTEIN FIC1 8 190 - -
Amo02g0603 191 PANTHER BON1-ASSOCIATED-LIKE PROTEIN 8 190 - -
Amo02g0603 191 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 7 137 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g0603 Amo-Chr2 7862390 7865574 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g0603 - - adu:107473351 358.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g0488 12 7780365 7782236 Amo02g0603 02 7862390 7865574 hybridization