Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g0151 ATGGAAGAGAAGAAAGCAAAGGCCAAAGCTTTTCTTCTCTTCTTCTTCTTCTTCTTCTCAGTGTTCATCACACTCTCCACCGCCACCAAAGAAACCCAAACCCTTATCCTCCACCCACTCCCATCTCAACCCACCCTCTATTGGCCCGAACTCGAAACCGAGCAACCCGACCCGGAACCCGAATCAGCTTCGCTCTCTGTCTCTCTTCACCACATCGATGCACTCTCTTCCAACAAAACACCGCACGAATTGTTTACCCAAAGGCTCCAAAGGGACGCTGCTAGGGTCAAAATCGTAACTTCCTTCGTCTCCAAAGCTCCATTTTCTTCTTCACCCAAGAACCAAACCGGGTTCGGATCACAACCCGGTTTCAGCTTCAGCAGCTCAGTCATTTCGGGTTTGGCTCAGGGCAGCGGCGAGTACTTCACGCGCCTCGGCGTCGGAACGCCGCCACGCTACCTCTACATGGTGCTCGACACCGGAAGCGACGTCGTTTGGCTCCAATGTGCGCCGTGCAAGAAGTGCTACTCAGAGTCCGACCCAGTTTTCGACCCGAAAGGGTCCCGGACCTTTGCCCCAGTACCCTGCGGTTCTCCGCTCTGCCGGCAGCTGGACTCGCCGGGATGCGACGCCCGGAAAAAGGTGTGCGAGTATCAGGTCTCATATGGAGACGGGTCCTTCACCGTCGGCGATTTTGCCACTGAGACATTGACTTTCCGGCGACGCGCCAGCGTCCCGCGCGTGGCCTTAGGCTGTGGACATGACAACGAGGGGCTCTTTGTTGGGGCTGCGGGCCTTTTGGGCCTGGGCCGGGGCATGCTTTCCTTTCCGACCCAAGCCGGTYRCCGGTTCAATAACAAATTCAGTTATTGTTTAGTGGACCGAGCTGCTTCATCAAAACCGTCTTCAATGGTTTTTGGRGATTTGGCAGTTTCGAGAGCGGCACGGTTCACTCCGTTGTTAAAGAACCCAAAGCTCGACACATTTTACTATGTCGAACTGTTGGGAATTAGTGTTGGCGGGGTGCTGGTTCGTGGAATTTCGGCTTCTTTGTTTCGGCTTGACCGYACCGGAAATGGTGGGGTAATTATTGACTCGGGCACRTCAGTGACTCGATTGACCCGACCCGCTTATGAGGCTTTGAGYGACGCTTTTCYGGTTGGGGCAGCCCGSTTGAAACGGGCACCCGAYTACTCGTTATTTGATACTTGCTTTGATCTTTCGGGGATGACGCAAGTGAAAGTTCCGACCGTAGTGCTACATTTTCGAGGTGCCGATGTGTCACTTCCAGCCGGGAATTACCTAATTCCGGTGGATGATAAGGGAACTTACTGTTTCGCGTTCGCTGGGACGATGAGCGGGTTATCCATAATTGGGAATATCCAGCAACAAGGGTTTCGGGTCGTGTTTGATTTGGCGGTTCAAGTCAGAGCAAGGGATGTTCTGTGCGGTGACGAATCGGATGCGATGGATGAGGTGGAAGCGGATGCAGTTATGGCAGTAATAAGGAGGGTGCATGCAACGATTGTTGTTGTTGAAGACGTTGTCGGCGGACATAGGGATGAGTCCAATGGACCTAAAATTATCGCGCTCTACACTCCCTCTATCATCGCGCTCTACACGCCCTCTCTCTTATCGCGCTCTACGCGCCTTCAGAAGATCGCTGCTTGTTCTCTCTCCCTCAAGCACAGCATCTCCTTCTATGTTTTTCTTTTTTATGTCAGCAGCTCTAGCTTCGCCGCTCACATCTCCCTCTGCGTCACCACGTCACACGCGTCTTCCTCAACCATTTCACCAGAACTTACCCAAGTCGTGGATTATTGA 1824 0.528 MEEKKAKAKAFLLFFFFFFSVFITLSTATKETQTLILHPLPSQPTLYWPELETEQPDPEPESASLSVSLHHIDALSSNKTPHELFTQRLQRDAARVKIVTSFVSKAPFSSSPKNQTGFGSQPGFSFSSSVISGLAQGSGEYFTRLGVGTPPRYLYMVLDTGSDVVWLQCAPCKKCYSESDPVFDPKGSRTFAPVPCGSPLCRQLDSPGCDARKKVCEYQVSYGDGSFTVGDFATETLTFRRRASVPRVALGCGHDNEGLFVGAAGLLGLGRGMLSFPTQAGXRFNNKFSYCLVDRAASSKPSSMVFGDLAVSRAARFTPLLKNPKLDTFYYVELLGISVGGVLVRGISASLFRLDRTGNGGVIIDSGTSVTRLTRPAYEALSDAFXVGAARLKRAPDYSLFDTCFDLSGMTQVKVPTVVLHFRGADVSLPAGNYLIPVDDKGTYCFAFAGTMSGLSIIGNIQQQGFRVVFDLAVQVRARDVLCGDESDAMDEVEADAVMAVIRRVHATIVVVEDVVGGHRDESNGPKIIALYTPSIIALYTPSLLSRSTRLQKIAACSLSLKHSISFYVFLFYVSSSSFAAHISLCVTTSHASSSTISPELTQVVDY* 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g0151 607 CDD cnd41_like 140 473 IPR033873 -
Amo12g0151 607 PANTHER ASPARTYL PROTEASES 35 473 IPR001461 GO:0004190|GO:0006508
Amo12g0151 607 ProSiteProfiles Peptidase family A1 domain profile. 141 480 IPR033121 -
Amo12g0151 607 Pfam Xylanase inhibitor C-terminal 330 474 IPR032799 -
Amo12g0151 607 Pfam Xylanase inhibitor N-terminal 141 308 IPR032861 -
Amo12g0151 607 PANTHER ASPARTYL PROTEASE FAMILY PROTEIN 2-LIKE 35 473 - -
Amo12g0151 607 SUPERFAMILY Acid proteases 134 473 IPR021109 -
Amo12g0151 607 Gene3D Acid Proteases 307 478 IPR021109 -
Amo12g0151 607 PRINTS Pepsin (A1) aspartic protease family signature 362 373 IPR001461 GO:0004190|GO:0006508
Amo12g0151 607 PRINTS Pepsin (A1) aspartic protease family signature 456 471 IPR001461 GO:0004190|GO:0006508
Amo12g0151 607 PRINTS Pepsin (A1) aspartic protease family signature 147 167 IPR001461 GO:0004190|GO:0006508
Amo12g0151 607 Gene3D Acid Proteases 125 306 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g0151 Amo-Chr12 2300547 2306508 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g0151 131 475 Miscellaneous Gene Families AT1G77480 27.926 3.57e-27 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g0151 K22683 - gmx:100791511 669.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g0151 12 2300547 2306508 Amo12g0151 12 2300547 2306508 ECH
Amo16g1279 16 21955783 21957243 Amo12g0151 12 2300547 2306508 PCT
Amo12g0151 12 2300547 2306508 Amo16g1279 16 21955783 21957243 PCT