Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g0069 ATGAATGAAACAATTATTCAACCTAATCCTTCAATAGTGTACATGATTTTTCAGTTGAAAACTAACCAACCTTCTTCAAAGCTTATATATTCAATTGGACCTAATGGTGTTTTTCCTGATACTCAAGGCAAGTTGCAACAACATAGTGATGCTATATCCACAGTCATAGATTATTCACAAGGTGTAACTAGTGAAGTTTCTTACTTAAAACTCCGAAGAAGCCATGGAGTAATCAACATGACATCATGGAGCATTCTAATGATAATAGGTTACATAATTGCAAGGCATTTCAAGAAATGGGATCCAATTTGGTTTTATTTGCATGCTTCAATTCAAACAATTAGCTTTCTTGCCGGCACAGCTGGAATTTTAATTGGTTATGCATTGTCTAAGAAAGTTGATGCCAATGTCAATAATCACAAAAATATAGCTATCATCATTCTTGTCCTTGGAATCCTTCAGGTATTTGCAATCATATTAAGGCCAAAACCAGAATCAAAATTACGCAAGTATTGGAATTGGTACCATCATTATGTTGGGAGAATTTTGATTATATTCGCCATTGCAAACGCAATTTATGGACTCTCTTTAGCAAAGGAAGGTTCTAAATGGTTTCTTGCTTATGGAGTTTCTATTTCCATCTTAGTTATCATCAACATAATTTTGGAGGTTAGAATGTGGATAATTGCGAGAAGAAAAACTCAGTCCACAAATAATTCATCACATCCTCAATCCTTGGAATTTGCTTACCAAACTTAA 759 0.3386 MNETIIQPNPSIVYMIFQLKTNQPSSKLIYSIGPNGVFPDTQGKLQQHSDAISTVIDYSQGVTSEVSYLKLRRSHGVINMTSWSILMIIGYIIARHFKKWDPIWFYLHASIQTISFLAGTAGILIGYALSKKVDANVNNHKNIAIIILVLGILQVFAIILRPKPESKLRKYWNWYHHYVGRILIIFAIANAIYGLSLAKEGSKWFLAYGVSISILVIINIILEVRMWIIARRKTQSTNNSSHPQSLEFAYQT* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g0069 252 Gene3D - 51 240 - -
Amo12g0069 252 Coils Coil 250 252 - -
Amo12g0069 252 PANTHER BNAC01G39800D PROTEIN 3 228 - -
Amo12g0069 252 CDD Cyt_b561_FRRS1_like 57 210 - -
Amo12g0069 252 ProSiteProfiles Cytochrome b561 domain profile. 39 231 IPR006593 -
Amo12g0069 252 SUPERFAMILY Calcium ATPase, transmembrane domain M 161 241 IPR023298 -
Amo12g0069 252 SMART 561_7 74 195 IPR006593 -
Amo12g0069 252 PANTHER CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN 3 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g0069 Amo-Chr12 996289 1000402 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g0069 - - adu:110277534 483.796
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g0069 12 996289 1000402 Amo02g0280 02 3562338 3570789 hybridization