Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g0280 ATGAAGCCATCTCTACCACTCCTCTTGGTAACTACAACTTTTCTTGGATTATTCTTTCTTCCAATTTCAGAACCAAAATCTGACTCATGCAACATCAATCTAAACCTCAGAGTTCCTATCCCTTTTGATATAACAAACCTTCACTGCCTTTCAGTCTGGGATTCTCAGAGTTTCATCCTCAGATATGTTCAAACTTCTAGAAACACTTGGAGCTTCATTCTCTCAACCCCATATACAAATTCTTACATTGCTATGGGGTTCTCAACCAATGGTGGCATGGTAGGTTCAAGTGCCATAGTGGGGTGGGTGATATCAGGAGGAAAAGGTGGAGGGATCAAGCAATATTATCTTGGAGGGTATGCACCAAACCAAGTGGTTCCTAATAAAGGGAACCTTAATGTTGTGGCCAACTCAACCTTTATCACTTTAGAGTCCAATCATTTATACATGGTGTTTCAGTTACAAACTACTACTCAACCTTTGTCTTGGATCATATTTGCCACTGGTTCCATTGGATTATTCCCTCAAGCACCAAGTTTTGCATTAACAAAACACCTTGACAAGATTTCCCAAAGAATTGARTATTCAAAAGCAAAACTTGGAAGTTCACAAGGTGATAGTACTTCTAATTCTTCTTCTTCTTCTTCATCATCACAAGCAAATGGAAATAATGGAAGCAATGGTTCATTATCATCACAAGGAGATTCATGTGGTTCAAACCTGAACCTAAATGCTCCTCTTTTCTTTGACACAACAAAGCTCATTTGTATTCCTGTTTGGAATACTCAAGGTTTCATCCTTAGGTATTCTGAGAGTTCTCCAAACACATGGAGCTTCATTCTCTCAGCACCAAACCCTAATTCCTACATAGCAATAGGGTTCTCACCCAATGGAGGCATGGTTGGTGCAAGTGCCATAGTTGGTTGGATCTCAACAAATAATGGAGCTGGTGGAGGCATGAAACAATATTATCTAGCAGGGACAACACCTAACATGGTTGTTCCAGATAGGGGCAATTTAGTCATTCTAACCAACTCAACCTTAATCACATCACAATCCTCAACTTTGTACATGGTTTTCCAATTACAAACTAACCAACCTCTTTCAAGGGTTATTTTTGCCATTGGACCAAGTGGTACCTTTCCTTCATCACCAAGTTTTGCACTTTCCATGCACCAAGACAAATTCTCCATGACTTTGGATTACTCAACAGGTTCAAGTAGTTCATCGGAAAACCCTTCTATGAACTTGAAGAAAAGCCATGGATTGTTGAACATAGTGGCATGGGGTATCTTAGTGATAATGGGAGCCATAGTTGCTCGTTATTTCAAGGAATGGGATCCATTTTGGTTTTATTTTCATGCTTCAGTCCAATCATTGGGTTTTATTATTGGAATAATTGGTGTYATTAGTGGGCTTGTTCTTAATAATCAACTCCAAGTTGATGTTTCTCTTCACAAGGCTCTTGGTATCATCATTCTTGTCCTAGCTTGCCTTCAGATGATGGCTTTGCTTGCTAGACCTAACAAGGCATCAAAAATGAGGAAGTATTGGAATTTGTACCATCACAACACAGGAAGAGTTTTGATTATATTAGCCATTGCTAACATCTTCTATGGAATTCATTTAGGCAGAGAAGGAAACGCATGGAAGGTTGGCTATGGAATTGTTCTTGCCATTTTACTCTTTATTGGATTCCTTTTTGAGATAAACATGTGGAGTAGTTTAGAAGAAGATGATGACTAA 1746 0.3883 MKPSLPLLLVTTTFLGLFFLPISEPKSDSCNINLNLRVPIPFDITNLHCLSVWDSQSFILRYVQTSRNTWSFILSTPYTNSYIAMGFSTNGGMVGSSAIVGWVISGGKGGGIKQYYLGGYAPNQVVPNKGNLNVVANSTFITLESNHLYMVFQLQTTTQPLSWIIFATGSIGLFPQAPSFALTKHLDKISQRIEYSKAKLGSSQGDSTSNSSSSSSSSQANGNNGSNGSLSSQGDSCGSNLNLNAPLFFDTTKLICIPVWNTQGFILRYSESSPNTWSFILSAPNPNSYIAIGFSPNGGMVGASAIVGWISTNNGAGGGMKQYYLAGTTPNMVVPDRGNLVILTNSTLITSQSSTLYMVFQLQTNQPLSRVIFAIGPSGTFPSSPSFALSMHQDKFSMTLDYSTGSSSSSENPSMNLKKSHGLLNIVAWGILVIMGAIVARYFKEWDPFWFYFHASVQSLGFIIGIIGVISGLVLNNQLQVDVSLHKALGIIILVLACLQMMALLARPNKASKMRKYWNLYHHNTGRVLIILAIANIFYGIHLGREGNAWKVGYGIVLAILLFIGFLFEINMWSSLEEDDD* 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g0280 581 PANTHER BNAC01G39800D PROTEIN 8 204 - -
Amo02g0280 581 PANTHER BNAC01G39800D PROTEIN 232 574 - -
Amo02g0280 581 PANTHER CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN 8 204 - -
Amo02g0280 581 ProSiteProfiles Cytochrome b561 domain profile. 383 577 IPR006593 -
Amo02g0280 581 Gene3D - 395 575 - -
Amo02g0280 581 SMART 561_7 420 541 IPR006593 -
Amo02g0280 581 ProSiteProfiles DOMON domain profile. 56 178 IPR005018 -
Amo02g0280 581 PANTHER CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN 232 574 - -
Amo02g0280 581 SMART DOMON_3 289 376 IPR005018 -
Amo02g0280 581 SMART DOMON_3 82 169 IPR005018 -
Amo02g0280 581 ProSiteProfiles DOMON domain profile. 263 376 IPR005018 -
Amo02g0280 581 CDD DOMON_DOH 263 397 IPR045266 -
Amo02g0280 581 CDD Cyt_b561_FRRS1_like 416 570 - -
Amo02g0280 581 MobiDBLite consensus disorder prediction 200 231 - -
Amo02g0280 581 CDD DOMON_DOH 48 185 IPR045266 -
Amo02g0280 581 Pfam Eukaryotic cytochrome b561 427 541 IPR006593 -
Amo02g0280 581 SUPERFAMILY CBD9-like 269 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g0280 Amo-Chr2 3562338 3570789 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g0280 - - lang:109356980 784.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g0069 12 996289 1000402 Amo02g0280 02 3562338 3570789 hybridization