Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g2425 ATGCGGCGACGGGCCGCCGATTTTCGGCGCCCGGTTCGACGGAGGTTCTCTTATTGGATCTGGGTTCTCCTTGGTTTGTCCTCTGTTGTAGGGTTAGTCTTGTTCGTTGTGCATCATAATCAGAATGAAGATCGGGACGAGTATCCGTTGCTGGAGAGAAATGCTAGACTTGAACATTTTGCTAAGGAGAGTTTGAATTTTACTGAAGAAATTTTAAGTGTAAAATCATTTTCACGACAGTTAACCCAACAAATGATTCTTGCCAAGGCTTATGTAGTTATTGCCAAAGAGCACAACAATCTTCACCTTGCTTGGCAGCTTAGCGCAAAGATCAGAGGTTGCCAACTTTTGCTTTCGAAAGCTGCGATGACAGGGGAGCCCGTAACACTGGAGGAAGCGGAGCCAATTATTAAAAGCCTTTCTTCTCTAATTTTTAAGGCACAAGACATTCATTATGACATTGCAACCACAATAGTGACTATGAAATCGCATATTCAAGCTCTTGAAGAGCGTGCCAATGCAGCCACGGTTCAAAGTACCGTGTTTGGTCAAATAGCAGCCGAGGGGTTACCGAAGAGTCTTCATTGCTTAAATGTGAAACTCATGTCTGATTGGCTAAAGAAGCCATCTCTGAAAGCACTCTCAGATGAGAAGAAAAACTCGCAGCGGCTTGTGGACAACAATCTCTATCATTTCTGCATATTTTCAGATAATGTACTGGCAACCTCAGTAGTTGTTAATTCAACTGTCTCCAATGCTGACCATCCAAAGCAGTTAGTCTTTCACATAGTCACTGATGGAGTGAATTATGGAGCAATGCAAACATGGTTCCTCAGTAATGACTTTAAAGGGGCCACCATAGAGGTACAGAATATTGAGGAGTTTCACTGGTTGAATGCAAGTTATTCTCCTATTGTCAAGCAGCTCCTGAATCCAGACTCAAAAACCTTTTATTTTGGGCTATATCAGGATGCAAATGTCGAACCGAAAATGCGGAATCCCAAATTTTTGTCTTTATTGAATCATCTTCGGTTTTACATCCCCGAGATTTATCCACAACTTGAGAAGGTTGTTTTCTTGGATGATGATGTTGTTGTACAGAAGGACCTGACTCAGCTTTTCTCACTGGATCTGCATGGCAATGTAAATGGTGCAGTGGAAACTTGCCTTGAAGCATTTCATCGGTACTACAAATATCTCAACTTCTCAAACTCAATTATAAGCTCAAAGTTTGACCCTCAGGCATGTGCATGGGCATTCGGTATGAACATTTTTGACTTGGTTGCATGGAGGAAGGCGAATGCGACCGCCAAATATCATTACTGGCAAGAGCAGAACGCTGATGGGACACTCTGGAAGCTTGGGACTCTTCCTCCTGGTCTTCTATGTTTTTATGGTCTGACAGAGCCACTTGACAGAAGATGGCATGTTTTAGGATTGGGTTATGACCTTAATATTGATAACCGTCTGATTGAAAGTGCGGCAGTCATTCACTTCAACGGGAACATGAAGCCATGGCTGAAGTTTGCTATAGGCAGGTATAAGCCACTATGGGACAAGTACATAAATCAAAGTCACCCTTATCTGCAAGACTGTGCCACAAGTTGA 1608 0.4279 MRRRAADFRRPVRRRFSYWIWVLLGLSSVVGLVLFVVHHNQNEDRDEYPLLERNARLEHFAKESLNFTEEILSVKSFSRQLTQQMILAKAYVVIAKEHNNLHLAWQLSAKIRGCQLLLSKAAMTGEPVTLEEAEPIIKSLSSLIFKAQDIHYDIATTIVTMKSHIQALEERANAATVQSTVFGQIAAEGLPKSLHCLNVKLMSDWLKKPSLKALSDEKKNSQRLVDNNLYHFCIFSDNVLATSVVVNSTVSNADHPKQLVFHIVTDGVNYGAMQTWFLSNDFKGATIEVQNIEEFHWLNASYSPIVKQLLNPDSKTFYFGLYQDANVEPKMRNPKFLSLLNHLRFYIPEIYPQLEKVVFLDDDVVVQKDLTQLFSLDLHGNVNGAVETCLEAFHRYYKYLNFSNSIISSKFDPQACAWAFGMNIFDLVAWRKANATAKYHYWQEQNADGTLWKLGTLPPGLLCFYGLTEPLDRRWHVLGLGYDLNIDNRLIESAAVIHFNGNMKPWLKFAIGRYKPLWDKYINQSHPYLQDCATS* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g2425 535 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 3 535 IPR029993 GO:0047262
Amo11g2425 535 CDD GT8_like_1 230 523 - -
Amo11g2425 535 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 232 532 IPR029044 -
Amo11g2425 535 PANTHER HEXOSYLTRANSFERASE 3 535 - -
Amo11g2425 535 SUPERFAMILY Nucleotide-diphospho-sugar transferases 230 532 IPR029044 -
Amo11g2425 535 Pfam Glycosyl transferase family 8 234 508 IPR002495 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g2425 Amo-Chr11 128890668 128894889 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g2425 1 532 Glycosyltransferase AT2G20810 54.935 0.0 595
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g2425 K13648 - gmx:100805886 958.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g2425 11 128890668 128894889 Amo11g2425 11 128890668 128894889 ECH
Amo11g2425 11 128890668 128894889 Amo10g2550 10 88155819 88159563 PCT
Amo10g2550 10 88155819 88159563 Amo11g2425 11 128890668 128894889 PCT