LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Amo11g2121	ATGAAGACCACGAAGGGTGGCAAGGTCATGAATCCCACCGATGCTTATCGAAAGGAGCTTCGCAAGAAGGAATTGAAAAGGAATAAGAAGGAAAGGAAGAAGGTGAGGGAAGTGGGAATTCTTAAGAAAGATCCTGAACAGCTGAAGAAACAGATTGAGAACTTGGAAATGATGAAGGCTGATGGTGCTTTGGATAAGGCAAGAAAGCACAAGAAGAGACAACTACAAGATACACTTAACCTTGTCCTAAAGAAGAGGAGGGAATATGAAGATAAAATGAAGGAGAAGGGTGAGACCCCTGTTATGTTCAGTCATTTAGGGCCTCCCCGAAGAAGAACAACTGCAGAAGAAGAAGAGAGAGTTAAACACCCAAAGCCTGAGGATTCCGTTTATTACCATCCAACATTAAACCCTACAGGGGCTCCCCCACCTGGGAAACCTCCCATGTTTAAATCGTCTATAGGTCCCAGAATTCCCTTATCTGGTGCTTCATCGAGTACTGCTGCATCATCATCAGCAGCAGAGTCAGGGGATGATATGTTAACTGTACCTCCACCTCCGCCGCCACCCCCACTGCCTGAAGCTGGCAGTTCAAGTTTGGCCGAGGGCACTGCTTTACCTGCGGCATCTTTGCCTTTGCCTCCACCACCACCCATGCCTCCGAAGCCTGCTACTGCTGGACCTACATCATTACCACCACCTCCTTTGCCACCTCCACCTCCTGGTCCTCCACCTAAAGAGCAAGTTGCAAATCACCCGATACCCCCTCCACCTCCACCCCTACCACAGTCTCAGCCACCGCCACCTGGCACTAGTGGAGGTGAAGAGCGAAACCAATCTTCATCCGCAGATGATTTGCCTTCTAAGGAGACTGGTCAGATGCAGCTCCCTCCACCCCCTCTGCCGAATCGGATGCCACAAAAGTCTGATGGTGCTTTAGCTACCACTGACAATACGAATTCTCTGCCAAGCCATGAGATCCCAAAAATGGTTCCTGGGCCTCCTCCTCCAAGGCAACAACCTCCTGTTCCAGGATCCACCTTAGTTCCAACTTTGCAGGCCGATGTTTTGCCTCCTGGAATATCCCGTTTTCCACCACCCCCACCACCACCTGATATGAGGCCTCCTTTACCAGTGGCTGGACTTCCTGGTCAGGCACCACCTCCTGGAATGATGGTCCCAATGATGCCTAGGCCCCCATATGGTCCTCCACCTGGGCCTCCTCCAATGATGAGACCACCACTTCCTCCTGGTCCTCCTCCAAGCTTCCAAGAAGATGATCAAATGGCTTTTAGGCTACCTCCACCGCCTCCTCCTCCTCAAAAACCATCTTATGTTAAATCTGCTGCATCTACTGTTGTTAAAAGGCCATTAGCTCAGCACACACCAGAACTTACAGCTATGATTCCTGCATCTGTTCGGGTTAGAAGAGAGAATGCAGTGGCAAAATCCAAACCGAAACCGACAATATCAACCTCTACCTCTAGGACAGTCTCGGGGCCACCAACTATTGTAAAACCAGAGTCAGTGAGTTCATCATCGTCAGCTCCAAAAGCACAGAGCATCGATGATTCATACACAGCTTTCTTGGAGGACATGAAAGCCCTTGGTGCACTTGATGGTTGA	1626	0.4994	MKTTKGGKVMNPTDAYRKELRKKELKRNKKERKKVREVGILKKDPEQLKKQIENLEMMKADGALDKARKHKKRQLQDTLNLVLKKRREYEDKMKEKGETPVMFSHLGPPRRRTTAEEEERVKHPKPEDSVYYHPTLNPTGAPPPGKPPMFKSSIGPRIPLSGASSSTAASSSAAESGDDMLTVPPPPPPPPLPEAGSSSLAEGTALPAASLPLPPPPPMPPKPATAGPTSLPPPPLPPPPPGPPPKEQVANHPIPPPPPPLPQSQPPPPGTSGGEERNQSSSADDLPSKETGQMQLPPPPLPNRMPQKSDGALATTDNTNSLPSHEIPKMVPGPPPPRQQPPVPGSTLVPTLQADVLPPGISRFPPPPPPPDMRPPLPVAGLPGQAPPPGMMVPMMPRPPYGPPPGPPPMMRPPLPPGPPPSFQEDDQMAFRLPPPPPPPQKPSYVKSAASTVVKRPLAQHTPELTAMIPASVRVRRENAVAKSKPKPTISTSTSRTVSGPPTIVKPESVSSSSSAPKAQSIDDSYTAFLEDMKALGALDG*	542

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Amo11g2121	541	MobiDBLite	consensus disorder prediction	478	521	-	-
	Amo11g2121	541	Coils	Coil	13	33	-	-
	Amo11g2121	541	PANTHER	WW DOMAIN-BINDING PROTEIN 11	2	540	-	-
	Amo11g2121	541	PANTHER	WW DOMAIN-BINDING PROTEIN 11	2	540	IPR019007	GO:0006396
	Amo11g2121	541	MobiDBLite	consensus disorder prediction	309	325	-	-
	Amo11g2121	541	MobiDBLite	consensus disorder prediction	209	269	-	-
	Amo11g2121	541	MobiDBLite	consensus disorder prediction	270	289	-	-
	Amo11g2121	541	MobiDBLite	consensus disorder prediction	91	451	-	-
	Amo11g2121	541	Coils	Coil	72	92	-	-
	Amo11g2121	541	Pfam	mRNA biogenesis factor	126	186	-	-
	Amo11g2121	541	MobiDBLite	consensus disorder prediction	485	521	-	-
	Amo11g2121	541	Pfam	WW domain binding protein 11	7	83	IPR019007	GO:0006396
	Amo11g2121	541	MobiDBLite	consensus disorder prediction	110	129	-	-
	Amo11g2121	541	MobiDBLite	consensus disorder prediction	158	177	-	-
	Amo11g2121	541	MobiDBLite	consensus disorder prediction	181	195	-	-
	Amo11g2121	541	MobiDBLite	consensus disorder prediction	328	344	-	-
	Amo11g2121	541	MobiDBLite	consensus disorder prediction	1	34	-	-
	Amo11g2121	541	MobiDBLite	consensus disorder prediction	360	423	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Amo11g2121	Amo-Chr11	116499743	116505540	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Amo11g2121	-		-	gsj:114393646	579.326

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Amo11g2121	11	116499743	116505540	Amo11g2121	11	116499743	116505540	ECH
	Amo01g4172	01	117021780	117027781	Amo11g2121	11	116499743	116505540	hybridization