Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g2120 ATGAAGGGTGTTCTAATTTCCATCAACTTTATCTTTTGTTGCTTCTTACTGTTTTTGGATTCATCAACTTCACTTCCTTTATGCGTTGACTCAAGTGCACCTTTCATCCTCAATAGCACACTTGAATTTTGTCCTTACAATGGAAGCACTTGCTGCAACTCCACAGAAGATGCACAAATTCAGAAACAATTCCAGCTTATGAACATCTCTGATACTACCTGTGCCTCAGCTCTGAAATCGATACTTTGTGCGAGGTGTGATCCGTATTCGGCCGAGCTGTTTACAGTTCAATCGACGCCCCGGTCAGTTCCCTTGCTCTGCAATTCCACCATTGCATCCAATTCCTCCCAGTCAAAGGCAGTAGCAGTGGAAGACTTCTGCTCTCAAGTCTGGGAATCATGTCAATCTGTGTCAATAAAGAACTCGCCATTTTCGCCTTCATTACAAGGCCAAGCAGGGAGAACACCATCTAAAAGCAATCCAAGCAAACTCACAGATCAATGGCAGTCGAAAACAGATTTTTGTACTGCATTTGGTGGATCCTCCACTAGTGAATCTGTATGCTTTGAAGGAGAACCTGTTGCATTAAAGAACACTGACTCAGAAGCTCCTATTAATCCTCCACATGGCTTGTGCCTGGAAAAAATTGGCAATGGATCCTATCTCAACATGGTTGCTCATCCAGATGGCACGAACCGTGCATTCTTCTCGAATCAGAAGGGACAAGTTTGGTTAGCAACTATTCCTGCTGATGGATCAGGAGGACAATTGCAGCTTGATGAGTCAAGTCCCTTTGTTGATCTAACTGATATGGTTTATAGTGATGCTAAACTTGGAATGATGGGAATGGCATTCCATCCGAAATTCGCAGAAAATGGCCGGTTCTTCGCCTCATTCACCTGTGACAAAGATAAGTGGTCTGGTTGTAATGGAATATGTTCTTGTAACTCAAATGTTAATTGTGATCCTTCAAAGATAGGCACAGGTAGTAGTGGTGTACAACCCTGCCAATATCAAGCTGTTGTTGCTGAATATACTGCTAATGGTACCGCGTCTCAGCCTTCATCGGCTGTAAGTGCTAAACCAACAGAGGTGAGAAGGATATTTACCATGGGGTTGCCTTCTAATACTGAGAATGGAGGTCAGATTCTCTTTGGACCTGATGATGGGTACTTGTACTTCATGATGGGAGATGGTTCAGGCACTGGTGATCCATACAACTTTGCTCAAAACAAGAAATCATTGCTTGGAAAGATTATGAGGCTTGATATAGACAACATCCCAAGTGCAGCAGAAATTAGCAAACAAGGTCTTTGGGGTAGCTATTCCATTCCTAAGGACAATCCATTCAGCCAAGACAATGGTTCACAGGCTGAAATATGGGCCTTGGGATTAAAAACTCCATGGCGATGCAGTTTTGATTCAGAAAGACCTTCCTACTTTTTCTGTGGAGATGCTGGACAGGATCTTTATGAGGAAGTGGATCTCATCACAAAAGGTGGAAACTATGGCTGGCGTGTTTATGAGGGTCCCTATCCATTCACCCCTAACGAATCACCTGGAGGAAATACCTCCAAAGACTCCATAAATCCAATTATGCCAATACTTGGATACAACCATTCGGAGGTTAACAAGAATGAAGGGTCAGCATGCATCATTGGGGGTTATATGTATCGATCTAACACTGATCCTTGCATGTATGGAAGGTACCTGTATGCTGATCTATATTCAGTTGCAGTGTGGGAAGCAACAGAAGATCCTGTAAACAGTGGAAACTTCAGCAAAAGCAGAATCCCCTTCAGCTGTTCACATGATTCTCCTATCAAATGTGATCCTGAGCCTGGAACCTCCCTCCCAGCGATAGGCTACATCTACTCATTTGGAGAGGACAACAACAAAGACGTGTATATCCTTACAAGCAAAGGCGTCTACAGAGTTGTTCGTCCGAGTCGCTGCAGCTACACTTGCTCTCAGGAAAAGGCAACAACAGAGGCTCCTTCTCCTTCTACTTCTCCATCTCATGCATGCCGTAACTTCTCTATATACCAGTTTCTGCAGATTTCATTTTTCTTGTTGCTTTTGATATGTTTTGTGTAG 2097 0.4335 MKGVLISINFIFCCFLLFLDSSTSLPLCVDSSAPFILNSTLEFCPYNGSTCCNSTEDAQIQKQFQLMNISDTTCASALKSILCARCDPYSAELFTVQSTPRSVPLLCNSTIASNSSQSKAVAVEDFCSQVWESCQSVSIKNSPFSPSLQGQAGRTPSKSNPSKLTDQWQSKTDFCTAFGGSSTSESVCFEGEPVALKNTDSEAPINPPHGLCLEKIGNGSYLNMVAHPDGTNRAFFSNQKGQVWLATIPADGSGGQLQLDESSPFVDLTDMVYSDAKLGMMGMAFHPKFAENGRFFASFTCDKDKWSGCNGICSCNSNVNCDPSKIGTGSSGVQPCQYQAVVAEYTANGTASQPSSAVSAKPTEVRRIFTMGLPSNTENGGQILFGPDDGYLYFMMGDGSGTGDPYNFAQNKKSLLGKIMRLDIDNIPSAAEISKQGLWGSYSIPKDNPFSQDNGSQAEIWALGLKTPWRCSFDSERPSYFFCGDAGQDLYEEVDLITKGGNYGWRVYEGPYPFTPNESPGGNTSKDSINPIMPILGYNHSEVNKNEGSACIIGGYMYRSNTDPCMYGRYLYADLYSVAVWEATEDPVNSGNFSKSRIPFSCSHDSPIKCDPEPGTSLPAIGYIYSFGEDNNKDVYILTSKGVYRVVRPSRCSYTCSQEKATTEAPSPSTSPSHACRNFSIYQFLQISFFLLLLICFV* 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g2120 698 Gene3D - 217 633 IPR011042 -
Amo11g2120 698 PANTHER HIPL1 PROTEIN-LIKE 2 698 - -
Amo11g2120 698 PANTHER HEDGEHOG-INTERACTING PROTEIN 2 698 - -
Amo11g2120 698 MobiDBLite consensus disorder prediction 143 166 - -
Amo11g2120 698 Pfam Glucose / Sorbosone dehydrogenase 224 531 IPR012938 -
Amo11g2120 698 SUPERFAMILY Soluble quinoprotein glucose dehydrogenase 206 517 IPR011041 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g2120 Amo-Chr11 116483307 116488582 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g2120 - - gmx:100778890 1071.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g2120 11 116483307 116488582 Amo11g2120 11 116483307 116488582 ECH
Amo01g4171 01 117005292 117010585 Amo11g2120 11 116483307 116488582 hybridization