Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g4171 ATGAAGGGTGTTCTAATTTCCATCAACTTTATCTTTTGTTGCTTCTTACTGTTTTTGGATTCATCAACTTCACTTCCTTTATGCGTTGACTCAAGTGCACCTTTCATCCTCAATAGCACACTTGAATTTTGTCCTTACAATGGAAGCACTTGCTGCAACTCCACAGAAGATGCACAAATTCAGAAACAATTCCAGCTTATGAACATCTCTGATACTACCTGTGCCTCAGCTCTGAAATCGATACTTTGTGCGAGGTGTGATCCGTATTCGGCCGAGCTGTTTACAGTTCAATCGACGCCCCGGTCAGTTCCCTTGCTCTGCAATTCCACCATTGCATCCAATTCCTCCCAGTCAAAGGCAGTAGCAGTGGAAGACTTCTGCTCTCAAGTCTGGGAATCATGTCAATCTGTGTCAATAAAGAACTCGCCATTTTCGCCTTCATTACAAGGCCAAGCAGGGAGAACACCATCTAAAAGCAATCCAAGCAAACTCACAGATCAATGGCAGTCGAAAACAGATTTTTGTACTGCATTTGGTGGATCCTCCACTAGTGAATCTGTATGCTTTGAAGGAGAACCTGTTGCATTAAAGAACACTGACTCAGAAGCTCCTATTAYTCCTCCACATGGCTTGTGCCTMGAAAAAATTGGCAATGGATCCTATCTCAACATGGTTGCTCATCCAGATGGCACGAACCGTGCATTCTTCTCGAATCAGAAGGGACAAGTTTGGTTAGCAACTATTCCTGCTGATGGATCAGGAGGAKAATTGCAGCTTGATGAGTCAAGTCCCTTTGTTGATCTAACTGATATGGTTTATAGTGATGCTAAACTTGGAATGATGGGAATGGCATTCCATCCGAAATTCGCAGAAAATGGCCGGTTCTTCGCCTCATTCACCTGTGACAAAGATAAGTGGTCTGGTTGTAATGGAATATGTTCTTGTAACTCAAATGTTAATTGTGATCCTTCAAAGATAGGCACAGGTAGTAGTGGTGTACAACCCTGCCAATATCAAGCTGTTGTTGCTGAATATACTGCTAATGGTACCGCGTCTCAGCCTTCATCGGCTGTAAGTGCTAAACCAACAGAGGTGAGAAGGATATTTACCATGGGGTTGCCTTCTAATACTGAGAATGGAGGTCAGATTCTCTTTGGACCTGATGATGGGTACTTGTACTTCATGATGGGAGATGGTTCAGGCACTGGTGATCCATACAACTTTGCTCAAAACAAGAAATCATTGCTTGGAAAGATTATGAGGCTTGATATAGACAACATCCCAAGTGCAGCKGAAATTAGCAAACAAGGTCTTTGGGGTAGCTATTCCATTCCTAAGGACAATCCATTCAGCCAAGACAATGGTTCACAGGCTGAAATATGGGCCTTGGGATTAAAAACTCCATGGCGATGCAGTTTTGATTCAGAAAGACCTTCCTACTTTTTCTGTGGAGATGCTGGACAGGATCTTTATGAGGAAGTGGATCTCATCACAAAAGGTGGAAACTATGGCTGGCGTGTTTATGAGGGTCCCTATCCATTCACCCCTAARGAATCACCTGGAGGKAATACCTCCAAAGACTCCATAAATCCAATTATGCCAATACTTGGATACAACCATTCGGAGGTTAACAAGAATGAAGGGTCAGCATGCATCATTGGGGGTTATATGTATCGATCTAACACTGATCCTTGCATGTATGGAAGGTACCTGTATGCTGATCTATATTCAGTTGCAGTGTGGGAAGCAACAGAAGATCCTGTAAACAGTGGAAACTTCAGCAAAAGCAGAATCCCCTTCAGCTGTTCACATGATTCTCCTATCAAATGTGATCCTGSGCCTGGAACCTCCCTCCCAGCGKTAGGCTACATCTACTCATTTGGAGAYGACAACAACAAAGACGTGTATATCCTTYCYAGCYAAGGCGTCTACAGAGTTGTTCGTCCGAGTCGCTGCAGRTACACTTGCTCRCAGGAAAAGGCAACAACAGAGGCTCCTTCTCCTTCTACTTCTCCATCTCATGCATGCCGTAACTTCTCTATATACCAGTTTCTGCAGATTTCATTTTTCTTGTTGCTTTTGATATGTTTTGTGTAG 2097 0.4311 MKGVLISINFIFCCFLLFLDSSTSLPLCVDSSAPFILNSTLEFCPYNGSTCCNSTEDAQIQKQFQLMNISDTTCASALKSILCARCDPYSAELFTVQSTPRSVPLLCNSTIASNSSQSKAVAVEDFCSQVWESCQSVSIKNSPFSPSLQGQAGRTPSKSNPSKLTDQWQSKTDFCTAFGGSSTSESVCFEGEPVALKNTDSEAPIXPPHGLCLEKIGNGSYLNMVAHPDGTNRAFFSNQKGQVWLATIPADGSGGXLQLDESSPFVDLTDMVYSDAKLGMMGMAFHPKFAENGRFFASFTCDKDKWSGCNGICSCNSNVNCDPSKIGTGSSGVQPCQYQAVVAEYTANGTASQPSSAVSAKPTEVRRIFTMGLPSNTENGGQILFGPDDGYLYFMMGDGSGTGDPYNFAQNKKSLLGKIMRLDIDNIPSAAEISKQGLWGSYSIPKDNPFSQDNGSQAEIWALGLKTPWRCSFDSERPSYFFCGDAGQDLYEEVDLITKGGNYGWRVYEGPYPFTPKESPGGNTSKDSINPIMPILGYNHSEVNKNEGSACIIGGYMYRSNTDPCMYGRYLYADLYSVAVWEATEDPVNSGNFSKSRIPFSCSHDSPIKCDPXPGTSLPAXGYIYSFGDDNNKDVYILXSXGVYRVVRPSRCRYTCSQEKATTEAPSPSTSPSHACRNFSIYQFLQISFFLLLLICFV* 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g4171 698 Pfam Glucose / Sorbosone dehydrogenase 224 532 IPR012938 -
Amo01g4171 698 PANTHER HIPL1 PROTEIN-LIKE 2 698 - -
Amo01g4171 698 MobiDBLite consensus disorder prediction 145 166 - -
Amo01g4171 698 Gene3D - 217 625 IPR011042 -
Amo01g4171 698 PANTHER HEDGEHOG-INTERACTING PROTEIN 2 698 - -
Amo01g4171 698 SUPERFAMILY Soluble quinoprotein glucose dehydrogenase 217 517 IPR011041 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g4171 Amo-Chr1 117005292 117010585 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g4171 - - gmx:100778890 1067.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo01g4171 01 117005292 117010585 Amo11g2120 11 116483307 116488582 hybridization