Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g2059 ATGGATAAAAAGAAGATCCTCAAGAGGAAGCAGCATCAGCTGCAAGTGGAGGCGGAGCTCCACCGCCTCCCTAATCCGCAACCAAAATCAAAATCAGTTCGTGTTTCTTCTAAATCAGCCACCACTACCGCCACCGCCACCGCCACCGCCACGAATCCATACTCTTCTCACAGTGGCCCCACTCCACAAGAATGCCTCTCCCTACGAGACACCCTCTTAGCCCTCCACGGTTTCCCTCCCGAATTCGCCAAGTACCGCAACCGACAACACGATGACGACAACCACCACCACGCCGCTACCATCCCGCCGGAAACCGTGCTCGACGGTTTGGTCCGAACAGTGCTCTCTCAGAACACCACCGAGTCCAATTCCCAAAAGGCCTTCGATTCCCTCAAATCATCCTTCCCCACCTGGGAACATGTGCTTGGTGCGGATTCGAAGGAGTTGGAGAATGCGATTCGATGCGGGGGTTTGGCACCCACAAAGGCCTCGTGTATTAAGAACATGTTGCGTTGCTTGCTGGAGAAGAGAGGCAAGTTGTGCTTGGAGTATTTGCGAGACTTGTCCATTGATGAAGTTAAGGCTGAGCTTTCTCTTTTCAAGGGAATTGGTCCCAAAACTGTGGCTTGTGTGTTGATGTTCAATCTTCAGCTAGATGATTTTCCCGTTGACACTCACATTTTTGAGATAGCAAAAACAATTGGTTGGGTGCCAGCTGCTGCTGACAGAAACAAGACATATCTTCATCTAAACGAAAGGATCCCAAATGAACTTAAATTTGACCTGAATTGTCTCATGTATACACATGGGAAGCTTTGCCGTAAATGCACAAGTAAAAAGGGTAACAAGCAACGAGAGAAATGTGATGATAATAACTCCTGTCCTATATTGAATTATTGTAAAGAACCAGTTTGA 915 0.4809 MDKKKILKRKQHQLQVEAELHRLPNPQPKSKSVRVSSKSATTTATATATATNPYSSHSGPTPQECLSLRDTLLALHGFPPEFAKYRNRQHDDDNHHHAATIPPETVLDGLVRTVLSQNTTESNSQKAFDSLKSSFPTWEHVLGADSKELENAIRCGGLAPTKASCIKNMLRCLLEKRGKLCLEYLRDLSIDEVKAELSLFKGIGPKTVACVLMFNLQLDDFPVDTHIFEIAKTIGWVPAAADRNKTYLHLNERIPNELKFDLNCLMYTHGKLCRKCTSKKGNKQREKCDDNNSCPILNYCKEPV* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g2059 304 MobiDBLite consensus disorder prediction 29 63 - -
Amo11g2059 304 SUPERFAMILY DNA-glycosylase 97 301 IPR011257 GO:0003824|GO:0006281
Amo11g2059 304 PANTHER - 10 302 - -
Amo11g2059 304 MobiDBLite consensus disorder prediction 1 63 - -
Amo11g2059 304 Gene3D Hypothetical protein; domain 2 105 222 - -
Amo11g2059 304 Gene3D - 223 280 IPR023170 -
Amo11g2059 304 Pfam HhH-GPD superfamily base excision DNA repair protein 111 255 IPR003265 GO:0006284
Amo11g2059 304 SMART endo3end 115 272 IPR003265 GO:0006284
Amo11g2059 304 CDD ENDO3c 110 270 IPR003265 GO:0006284
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g2059 Amo-Chr11 111744933 111747544 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g2059 K10773 - gmx:100802952 405.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g2059 11 111744933 111747544 Amo11g2059 11 111744933 111747544 ECH
Amo01g2599 01 92829088 92831746 Amo11g2059 11 111744933 111747544 hybridization