Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g2599 ATGGATAAAAAGAAGATCCTCAAGAGGAAGCAGCATCAGCTGCAAGTGGAGGCGGAGCTCCACCGCCTCCCTAACCAGCAACCAAAATCAAAATCAGTTCGTGTTTCTTCTAAATCAGCCACCACCGCCACCACCACCGCCACGAATCCATACTCTTCTCACAGTGGCCCCACTCCACAAGAATGCCTCTCCCTACGAGACACCCTCTTAGCCCTCCACGGTTTCCCTCCCGAATTCGCCAAGTACCGCAAGCGACAACACGTTGACGACAACCACCACCACGCCGCCACCATCCCGCCGGAAACCGTGCTCGACGGTTTGGTCCGAACAGTGCTCTCTCAGAACACCACCGAGTCCAATTCCCAAAAGGCGTTCGATTCCCTCAAATCATCCTTCCCCACCTGGGAACATGTGCTTGGTGCGGATTCGAAGGAGTTGGAGAATGCGATTCGATGCGGGGGTTTGGCACCCACGAAGGCTTCGTGTATTAAGAACATGTTGCGTTGCTTGCTGGAGAAGAGAGGCAAGTTGTGCTTGGAGTATTTGCGAGACTTGTCCATTGATGAAGTTAAGGCTGAGCTCTCTCTTTTCAAGGGAATTGGTCCCAAAACTGTGGCTTGTGTGTTGATGTTCAATCTTCAGCTAGATGATTTTCCCGTTGACACTCACATTTTTGAGATAGCAAAAACAATTGGTTGGGTGCCAGCTGCTGCTGACAGAAACAAGACATATCTTCATCTAAACGAAAGGATCCCAAATGAACTTAAATTTGACCTGAATTGTCTCATGTATACACATGGGAAGCTTTGCCGTAAATGCACAAGTAAAAAGGGTAACAAGCAAAGAGAGAAATGTGACGATAATAACTCCTGTCCTTTATTGAATTATTGTAAAGAACCAGTTTGA 906 0.4801 MDKKKILKRKQHQLQVEAELHRLPNQQPKSKSVRVSSKSATTATTTATNPYSSHSGPTPQECLSLRDTLLALHGFPPEFAKYRKRQHVDDNHHHAATIPPETVLDGLVRTVLSQNTTESNSQKAFDSLKSSFPTWEHVLGADSKELENAIRCGGLAPTKASCIKNMLRCLLEKRGKLCLEYLRDLSIDEVKAELSLFKGIGPKTVACVLMFNLQLDDFPVDTHIFEIAKTIGWVPAAADRNKTYLHLNERIPNELKFDLNCLMYTHGKLCRKCTSKKGNKQREKCDDNNSCPLLNYCKEPV* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g2599 301 SUPERFAMILY DNA-glycosylase 89 298 IPR011257 GO:0003824|GO:0006281
Amo01g2599 301 MobiDBLite consensus disorder prediction 25 60 - -
Amo01g2599 301 Pfam HhH-GPD superfamily base excision DNA repair protein 108 252 IPR003265 GO:0006284
Amo01g2599 301 SMART endo3end 112 269 IPR003265 GO:0006284
Amo01g2599 301 CDD ENDO3c 107 267 IPR003265 GO:0006284
Amo01g2599 301 Gene3D - 220 297 IPR023170 -
Amo01g2599 301 Gene3D Hypothetical protein; domain 2 102 219 - -
Amo01g2599 301 MobiDBLite consensus disorder prediction 1 60 - -
Amo01g2599 301 PANTHER - 15 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g2599 Amo-Chr1 92829088 92831746 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g2599 K10773 - gmx:100802952 410.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo01g2599 01 92829088 92831746 Amo11g2059 11 111744933 111747544 hybridization