Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g2032 ATGGCAGGAGGTGGAGGAGGGGGAGGAGCACCTGCACCAAAGGCAGATGAGCCACAGCCACATCCACCCAAGGATCAGCTTCCTAACATCTCTTACTGCATTACCAGTCCTCCTCCATGGCCTGAGGCTATACTTCTGGGTTTTCAGCATTATCTTGTGATGCTTGGTACAACTGTGCTAATCCCCACTGCTCTTGTTCCCCAGATGGGAGGTGGCAATGATGAGAAGGCAAGAGTTATTCAAACACTGCTCTTTGTAGCTGGAATCAACACATTGCTGCAAACATTGTTTGGAACTCGATTGCCTGCAGTAATTGGTGGCTCTTATACCTATGTTCCAACAACAATCTCAATTATTCTCTCTGGTCGATTCAGTGATGAACCAGATCCTATAGAGAAATTCAAGAGGATAATGCGGGCTACTCAGGGTGCTCTTATTGTTGCTTCAACTCTTCAAATAGTACTAGGCTTTAGTGGCCTCTGGCGTAATGTTGCAAGGTTCTTAAGTCCTCTTTCAGCAGCTCCTTTGGTCGCACTTGTTGGTTTCGGGCTATACGAGTTAGGCTTTCCTGGGGTTGCTAAATGTATAGAAATTGGATTGCCGCAGCTTATATTGCTAGTTTTTGTGTCGCAGTTTGTACCCCATGTGCTCAAAGGTGGAAAACATGTCTTTGACCGTTTTGCTGTGATATTTACGGTTGCAATTGTATGGTTATATGCATTTCTGCTCACTGTTGGAGGGGCCTATAACCACGCCGCACCCAAAACACAATCAACCTGTCGTACTGATCGTTCTGGCCTAATAGAAGCTGCTCCATGGATACGGGTCCCTTACCCTTTTCAATGGGGAGCACCTTCATTTGATGCAGGTGAAGCCTTTGCCATGATGATGGCATCCTTTGTTGCTCTTGTAGAGTCCAGTGGAGCTTTCATTGCTGTTTACCGGTATGCAAGTGCAACACCAATGCCACCATCTATTCTCAGCCGGGGTATTGGTTGGCAGGTAGGGAGTTGGCATTCTGTTATCAGGATTGTGGGGAACTGGCAACGGATCATCCGTAAATTTGGAGCAGTTTTCGCTTCCATTCCACCTCCAATTGTTGCTGCCTTGTATTGCTTGTTCTTCGCTTATGTTGGTGCTGGAGGCCTTAGTTTTCTTCAATTTTGCAACCTCAACAGTTTCAGGACTAAGTTTGTATTAGGCTTCTCCATCTTCCTTGGCTTGTCCATTCCGCAGTACTTCAACGAGTACACGGCAATCTACGGTTATGGTCCAGTTCACACCGGCGCAAGATGGTTCAATGACATAATCAATGTCCCATTCCAGTCAAAAGCATTTGTTGCTGGTGTCGTCGCGTATTTCTTGGACAACACGCTACATAAGGACCCAACCATTAGGAAGGACAGAGGAAAACATTGGTGGGACAAGTACAGGTCCTTCAAGGGTGATACAAGAAGTGAAGAGTTCTATTCACTGCCTTTCAATCTCAACAAGTACTTCCCTTCTGTGTAA 1512 0.461 MAGGGGGGGAPAPKADEPQPHPPKDQLPNISYCITSPPPWPEAILLGFQHYLVMLGTTVLIPTALVPQMGGGNDEKARVIQTLLFVAGINTLLQTLFGTRLPAVIGGSYTYVPTTISIILSGRFSDEPDPIEKFKRIMRATQGALIVASTLQIVLGFSGLWRNVARFLSPLSAAPLVALVGFGLYELGFPGVAKCIEIGLPQLILLVFVSQFVPHVLKGGKHVFDRFAVIFTVAIVWLYAFLLTVGGAYNHAAPKTQSTCRTDRSGLIEAAPWIRVPYPFQWGAPSFDAGEAFAMMMASFVALVESSGAFIAVYRYASATPMPPSILSRGIGWQVGSWHSVIRIVGNWQRIIRKFGAVFASIPPPIVAALYCLFFAYVGAGGLSFLQFCNLNSFRTKFVLGFSIFLGLSIPQYFNEYTAIYGYGPVHTGARWFNDIINVPFQSKAFVAGVVAYFLDNTLHKDPTIRKDRGKHWWDKYRSFKGDTRSEEFYSLPFNLNKYFPSV* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g2032 503 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 7 334 - -
Amo11g2032 503 Pfam Permease family 42 331 IPR006043 GO:0016020|GO:0022857|GO:0055085
Amo11g2032 503 Pfam Permease family 351 414 IPR006043 GO:0016020|GO:0022857|GO:0055085
Amo11g2032 503 MobiDBLite consensus disorder prediction 1 30 - -
Amo11g2032 503 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 350 503 - -
Amo11g2032 503 PANTHER NUCLEOBASE-ASCORBATE TRANSPORTER-LIKE PROTEIN 7 334 - -
Amo11g2032 503 PANTHER NUCLEOBASE-ASCORBATE TRANSPORTER-LIKE PROTEIN 350 503 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g2032 Amo-Chr11 110435220 110440109 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g2032 12 503 Organic Solute Cotransporters AT5G49990 75.285 0.0 776
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g2032 - - gmx:100804903 896.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g2032 11 110435220 110440109 Amo11g2032 11 110435220 110440109 ECH
Amo01g2579 01 90996545 91001958 Amo11g2032 11 110435220 110440109 hybridization