Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g2579 ATGGCAGGAGGTGGAGGAGGGGGAGGAGCACCTGCACCAAAGGCAGATGAGCCACAGCCACATCCACCCAAGGATCAGCTTCCTAACATCTCTTACTGCATTACCAGTCCTCCTCCATGGCCTGAGGCTATACTTCTGGGTTTTCAGCATTATCTTGTGATGCTTGGTACAACTGTGCTAATCCCCACTGCTCTTGTTCCCCAGATGGGAGGTGGCAATGATGAGAAGGCAAGAGTTATTCAAACACTGCTCTTTGTAGCTGGAATCAACACATTGCTGCAAACATTGTTTGGAACTCGATTGCCTGCAGTAATTGGTGGCTCTTATACCTATGTTCCAACAACAATCTCAATTATTCTCTCTGGTCGATTCAGTGATGAACCAGATCCTATAGAGAAATTCAAGAGGATAATGCGGGCTACTCAGGGTGCTCTTATTGTTGCTTCAACTCTTCAAATAGTACTAGGCTTTAGTGGCCTCTGGCGTAATGTTGCAAGGTTCTTAAGTCCTCTTTCAGCAGCTCCTTTGGTCGCACTTGTTGGTTTCGGGCTATACGAGTTAGGCTTTCCTGGGGTTGCTAAATGTATAGAAATTGGATTGCCGCAGCTTATATTGCTAGTTTTTGTGTCGCAGTTTGTACCCCATGTGCTCAAAGGTGGAAAACATGTCTTTGACCGTTTTGCTGTGATATTTACGGTTGCAATTGTATGGTTATATGCATTTCTGCTCACTGTTGGAGGGGCCTATAACCACGCCGCACCCAAAACACAATCAACCTGTCGTACTGATCGTTCTGGCCTAATAGAAGCTGCTCCATGGATACGGGTCCCTTACCCTTTTCAATGGGGAGCACCTTCATTTGATGCAGGTGAAGCCTTTGCCATGATGATGGCATCCTTTGTTGCTCTTGTAGAGTCCAGTGGAGCTTTCATTGCTGTTTACCGGTATGCAAGTGCAACACCAATGCCACCATCTATTCTCAGCCGGGGTATTGGTTGGCAGGGAGTTGGCATTCTGTTATCAGGATTGTGGGGAACTGGCAACGGATCATCCGTATCTGTAGAAAATGCTGGTCTTTTGGCTTTGACTCGTGTTGGCAGTCGGAGAGTTGTGCAAATATCTGCAGGGTTTATGATTTTCTTTTCAATTCTTGGTAAATTTGGAGCAGTTTTCGCTTCCATTCCACCTCCAATTGTTGCTGCCTTGTATTGCTTGTTCTTCGCTTATGTTGGTGCTGGAGGCCTTAGTTTTCTTCAATTTTGCAACCTCAACAGTTTCAGGACTAAGTTTGTATTAGGCTTCTCCATCTTCCTTGGCTTGTCCATTCCGCAGTACTTCAACGAGTACACGGCAATCTACGGTTATGGTCCAGTTCACACCGGCGCAAGATGGTTCAATGACATAATCAATGTCCCATTCCAGTCAAAAGCATTTGTTGCTGGTGTCGTCGCGTATTTCTTGGACAACACGCTACATAAGGACCCAACCATTAGGAAGGACAGAGGAAAACATTGGTGGGACAAGTACAGGTCCTTCAAGGGTGATACAAGAAGTGAAGAGTTCTATTCACTGCCTTTCAATCTCAACAAGTACTTCCCTTCTGTGTAA 1608 0.4571 MAGGGGGGGAPAPKADEPQPHPPKDQLPNISYCITSPPPWPEAILLGFQHYLVMLGTTVLIPTALVPQMGGGNDEKARVIQTLLFVAGINTLLQTLFGTRLPAVIGGSYTYVPTTISIILSGRFSDEPDPIEKFKRIMRATQGALIVASTLQIVLGFSGLWRNVARFLSPLSAAPLVALVGFGLYELGFPGVAKCIEIGLPQLILLVFVSQFVPHVLKGGKHVFDRFAVIFTVAIVWLYAFLLTVGGAYNHAAPKTQSTCRTDRSGLIEAAPWIRVPYPFQWGAPSFDAGEAFAMMMASFVALVESSGAFIAVYRYASATPMPPSILSRGIGWQGVGILLSGLWGTGNGSSVSVENAGLLALTRVGSRRVVQISAGFMIFFSILGKFGAVFASIPPPIVAALYCLFFAYVGAGGLSFLQFCNLNSFRTKFVLGFSIFLGLSIPQYFNEYTAIYGYGPVHTGARWFNDIINVPFQSKAFVAGVVAYFLDNTLHKDPTIRKDRGKHWWDKYRSFKGDTRSEEFYSLPFNLNKYFPSV* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g2579 535 Pfam Permease family 42 446 IPR006043 GO:0016020|GO:0022857|GO:0055085
Amo01g2579 535 MobiDBLite consensus disorder prediction 1 30 - -
Amo01g2579 535 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 7 535 - -
Amo01g2579 535 PANTHER NUCLEOBASE-ASCORBATE TRANSPORTER-LIKE PROTEIN 7 535 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g2579 Amo-Chr1 90996545 91001958 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g2579 12 535 Organic Solute Cotransporters AT5G49990 82.700 0.0 876
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g2579 - - gmx:100791553 1002.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo01g2579 01 90996545 91001958 Amo11g2032 11 110435220 110440109 hybridization