Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g2013 ATGCTCTCAACAAACCACCACACCCCTCAACCCCTCGGCCTCTCATCCCCACACCAACCCTCCTCTCTTCCTCCCAACCACCTCCACCTTCACCTCCATCGCCGCCACCTTCTCACCACCATCTCCCTCACTTTCACAACCCCGCTGCTGCCCGTTCTAGACCCGCCAGCCACTGCGCGTGGCCTCTTCCAGATGCCCCCTCCTCGCCTCACCAACCGGTATTTTCTGGTGAGGGCAGGGGAGTCTGAGTTCGAGAGCATGGGAGTGATCAACACGAATCCGGTGGCGAAGACCTCCGTGGACAGCGGCTTATCGGAGAGAGGGAAGAAGCAGGCAGTAAGAGCAGCTTTGGACTTGAAAGAAATGGGAGCTTGTGACAAGAGCTGTTGGATATGGCCAGCTATAACTCAGAGAGCGTACCAGACTGCTGAGATCATTGCTTCTCTCAATGCCGTTACTCGCAGTTTCATAGTCCCAGAGTACAGCTTTCTGGATGCTCGTGGATTAGGTGCCTATGAAGGAAAAAACCTGGAATCCGTTTCAGAAATATATGCATCGGATAGTGTATCACCAACCAACAAACCTCCTCCAGTTGATGACGGAACACCAAATGAGAGTGTTGCAGATGTCTTTGTTCGTGTAACACAACTCATGTCAATTCTTGAAACTCAGTACTCTGGGGACACAGTTGTCATAGTCTCGCCGGATTCGGACAACTTGACAATCCTTCAGGCTGGATTGATAGGACTTGATCTTAGAAGGCACAGGGATTTGTCTTTTGCACCTGGCGAAGTCCGATACGTCGACACAAACGACATTCCTACTTACAAGCAGCCTGCATCTGCTGTATATAAATGTTTCAACCCACCAAATTGTAACTAG 882 0.5091 MLSTNHHTPQPLGLSSPHQPSSLPPNHLHLHLHRRHLLTTISLTFTTPLLPVLDPPATARGLFQMPPPRLTNRYFLVRAGESEFESMGVINTNPVAKTSVDSGLSERGKKQAVRAALDLKEMGACDKSCWIWPAITQRAYQTAEIIASLNAVTRSFIVPEYSFLDARGLGAYEGKNLESVSEIYASDSVSPTNKPPPVDDGTPNESVADVFVRVTQLMSILETQYSGDTVVIVSPDSDNLTILQAGLIGLDLRRHRDLSFAPGEVRYVDTNDIPTYKQPASAVYKCFNPPNCN* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g2013 293 CDD HP_PGM_like 73 147 IPR013078 -
Amo11g2013 293 Gene3D - 69 280 IPR029033 -
Amo11g2013 293 MobiDBLite consensus disorder prediction 1 27 - -
Amo11g2013 293 SUPERFAMILY Phosphoglycerate mutase-like 73 272 IPR029033 -
Amo11g2013 293 Pfam Histidine phosphatase superfamily (branch 1) 75 270 IPR013078 -
Amo11g2013 293 MobiDBLite consensus disorder prediction 1 23 - -
Amo11g2013 293 PANTHER PHOSPHOGLYCERATE MUTASE FAMILY PROTEIN 20 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g2013 Amo-Chr11 109355439 109357795 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g2013 - - aip:107632255 520.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g2013 11 109355439 109357795 Amo11g2013 11 109355439 109357795 ECH
Amo01g2535 01 89049592 89051749 Amo11g2013 11 109355439 109357795 hybridization