Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g2535 ATGCTCTCAACAAACCACCACACCCCTCAACCCCTCGGCCTCTCATCCCCACACCAACCCTCATCTCTTCCTCCCAACCACCTCCACTTCCACCTCCATCGCCGCCACCTTCTCACCACCGTCTCCCTCACTTTCACAACCCCGCTGCTGCCCGTTCTAGACCCGCCAGCCACTGCGCGCGGCCTTTTCCAGATGCCCCCTCCTCGCCTCACCAACCGGTATTTTCTGGTGAGGGCAGGGGAGTCTGAGTTCGAGAGCATGGGAGTGATCAACACGAATCCGGTGGCGAAGACCTCCGTGGACAGCGGCTTATCGGAGAGAGGGAAGAAGCAGGCAGTAAGAGCAGCTTTGGACTTGAAAGAAATGGGAGCTTGTGACAAGAGCTGTTGGATATGGCCAGCTATAACTCAGAGAGCTTACCAGACTGCTGAGATCATTGCTTCTCTCAATGCCGTTACTCGCAGTTTCATAGTCCCAGAGTACAGCTTTCTGGATGCTCGTGGATTAGGTGCCTATGAAGGAAAAAACCTGGAATCCGTTTCAGAATGGAATGATGTTAATTCAAGTGTGGGAATGCGGCAGATATATGCATCAGATAGTGTATCACCAAACAACAAACCTCCTCCAGTTGATGATGGAACACCAAATGAGAGTGTTGCAGATGTCTTTGTTCGTGTAACACAACTCATGTCAATTCTTGAAACTCAGTACTCTGGGGACACAGTTGTCATAGTCTCGCCGGATTCGGACAACTTGACAATCCTTCAGGCTGGATTGATAGGACTTGATCTTAGAAGGCACAGGGATTTGTCTTTTGCACCTGGCGAAGTCCGATTCGTCGACACAAACGACATTCCTACTTACAAGCAGCCTGCATCTGCTGTATATAAATGTTTCAACCCACCAAATTGTAACTAG 918 0.5022 MLSTNHHTPQPLGLSSPHQPSSLPPNHLHFHLHRRHLLTTVSLTFTTPLLPVLDPPATARGLFQMPPPRLTNRYFLVRAGESEFESMGVINTNPVAKTSVDSGLSERGKKQAVRAALDLKEMGACDKSCWIWPAITQRAYQTAEIIASLNAVTRSFIVPEYSFLDARGLGAYEGKNLESVSEWNDVNSSVGMRQIYASDSVSPNNKPPPVDDGTPNESVADVFVRVTQLMSILETQYSGDTVVIVSPDSDNLTILQAGLIGLDLRRHRDLSFAPGEVRFVDTNDIPTYKQPASAVYKCFNPPNCN* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g2535 305 CDD HP_PGM_like 73 147 IPR013078 -
Amo01g2535 305 Gene3D - 69 292 IPR029033 -
Amo01g2535 305 SUPERFAMILY Phosphoglycerate mutase-like 73 284 IPR029033 -
Amo01g2535 305 MobiDBLite consensus disorder prediction 1 27 - -
Amo01g2535 305 Pfam Histidine phosphatase superfamily (branch 1) 75 282 IPR013078 -
Amo01g2535 305 PANTHER PHOSPHOGLYCERATE MUTASE FAMILY PROTEIN 21 305 - -
Amo01g2535 305 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g2535 Amo-Chr1 89049592 89051749 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g2535 - - aip:107632255 560.836
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo01g2535 01 89049592 89051749 Amo11g2013 11 109355439 109357795 hybridization