Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g1695 ATGGTGGCCGTTTTACCGTTGGAAACTGCCATGAACGCTCGCGACGCTACTCTTTTCGCCACCGCAACCCTCTTTGGCGCCGTTACCTCTGCACTTGCTCTCCGCTTCTTCTACCGCTCCCGAAACCATCCCCAAACCCAAAACGGAACCGTTTCCAATCACCGCCATTCACGTGGTGACCCTTACGATCCTTCCAAGCGCAAGCAGTACTTGTCGTGGGATGATTATTTCATGGCGATTGCGTTTTTGTCTGCTGAAAGATCCAAGGACCCTAACAGGCAGGTAGGGGCATGCTTGGTGAGTCAGGATGACATAATTCTTGGCATTGGCTATAATGGATTCCCAAGAGGTTGTTCCGATGACAAGCTACCATGGGCAAAGAAATCCAGGAGTGGGAATCCTTTAGAGACAAAATACCCCTATGTTTGTCATGCGGAAGTAAATGCTATTCTTAACACAAATCACGCCTCTGCTGCTGGACAACGGCTTTATGTGACCATGTTTCCCTGCAATGAATGTGCCAAGATCATAATCCAGTCAGGAGTTTCTGAAGTGGTTTATTTTGTGGAGAAGTTAGAAAGTTCTGATATTGCATATACTGCTTCTCACAAGCTACTATCATTGGCTGGTGTTAAGGTCAGGAAACATCAACCACTTATGAACGAAATTCATCTTAAGTTTGAGGAACGCTAG 693 0.4661 MVAVLPLETAMNARDATLFATATLFGAVTSALALRFFYRSRNHPQTQNGTVSNHRHSRGDPYDPSKRKQYLSWDDYFMAIAFLSAERSKDPNRQVGACLVSQDDIILGIGYNGFPRGCSDDKLPWAKKSRSGNPLETKYPYVCHAEVNAILNTNHASAAGQRLYVTMFPCNECAKIIIQSGVSEVVYFVEKLESSDIAYTASHKLLSLAGVKVRKHQPLMNEIHLKFEER* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g1695 230 Gene3D Cytidine Deaminase, domain 2 64 230 - -
Amo11g1695 230 Pfam Cytidine and deoxycytidylate deaminase zinc-binding region 72 188 IPR002125 -
Amo11g1695 230 ProSitePatterns Cytidine and deoxycytidylate deaminases zinc-binding region signature. 144 177 IPR016192 GO:0008270|GO:0016787
Amo11g1695 230 ProSiteProfiles Cytidine and deoxycytidylate deaminases domain profile. 72 213 IPR002125 -
Amo11g1695 230 PANTHER CYTIDINE/DEOXYCYTIDYLATE DEAMINASE FAMILY PROTEIN 11 229 - -
Amo11g1695 230 SUPERFAMILY Cytidine deaminase-like 74 219 IPR016193 GO:0003824
Amo11g1695 230 PANTHER DEOXYCYTIDYLATE DEAMINASE-RELATED 11 229 IPR015517 -
Amo11g1695 230 MobiDBLite consensus disorder prediction 45 65 - -
Amo11g1695 230 CDD deoxycytidylate_deaminase 74 187 IPR035105 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g1695 Amo-Chr11 75471766 75474129 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g1695 K01493 - gmx:100792003 369.777
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g1695 11 75471766 75474129 Amo11g1695 11 75471766 75474129 ECH
Amo01g2164 01 65844657 65847046 Amo11g1695 11 75471766 75474129 hybridization