Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g2164 ATGGTGGCCGTTCTACCGTTGGAAACTGCCATGAACGCTCGCGACGCTACTCTTTTCGCCACCGCAACCCTCTTTGGCGCCGTTACCTCTGCACTTGCTCTCCGCTTCTTCTACCGCTCCCGAAACCATCCCCAAACCCAAAACGGAACCATTTCCAATCACCGCCATTCACGTGGTGACCCTTACGATCCTTCCAAGCGCAAACAATACTTGTCGTGGGATGATTATTTCATGGCGATTGCGTTTTTGTCTGCTGAAAGATCCAAGGACCCTAACAGGCAGGTAGGGGCATGCTTGGTGAGTCAGGATGACATAATTCTTGGCATTGGCTATAATGGATTCCCAAGAGGTTGTTCCGATGACAAGCTACCATGGGCAAAGAAATCCAGGAGTGGGAATCCTTTAGAGACAAAATACCCATATGTTTGTCATGCGGAAGTAAATGCTATTCTTAACACAAATCACGCCTCTGCTGCTGGACAACGGCTTTATGTGACCATGTTTCCCTGCAATGAATGTGCAAAGATCATAATCCAGTCAGGAGTTTCTGAAGTGGTTTATTTTGTGGAGAAGTTAGAAAGTTCTGATATTGCATATACTGCTTCTCACAAGCTACTGTCATTGGCTGGTGTTAAGGTCAGGAAGCATCAACCACTTATGAACGAAATTCATCTTAAGTTTGAGGAACGCTAG 693 0.4632 MVAVLPLETAMNARDATLFATATLFGAVTSALALRFFYRSRNHPQTQNGTISNHRHSRGDPYDPSKRKQYLSWDDYFMAIAFLSAERSKDPNRQVGACLVSQDDIILGIGYNGFPRGCSDDKLPWAKKSRSGNPLETKYPYVCHAEVNAILNTNHASAAGQRLYVTMFPCNECAKIIIQSGVSEVVYFVEKLESSDIAYTASHKLLSLAGVKVRKHQPLMNEIHLKFEER* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g2164 230 Gene3D Cytidine Deaminase, domain 2 64 230 - -
Amo01g2164 230 Pfam Cytidine and deoxycytidylate deaminase zinc-binding region 72 188 IPR002125 -
Amo01g2164 230 ProSitePatterns Cytidine and deoxycytidylate deaminases zinc-binding region signature. 144 177 IPR016192 GO:0008270|GO:0016787
Amo01g2164 230 MobiDBLite consensus disorder prediction 45 64 - -
Amo01g2164 230 ProSiteProfiles Cytidine and deoxycytidylate deaminases domain profile. 72 213 IPR002125 -
Amo01g2164 230 SUPERFAMILY Cytidine deaminase-like 74 219 IPR016193 GO:0003824
Amo01g2164 230 CDD deoxycytidylate_deaminase 74 187 IPR035105 -
Amo01g2164 230 PANTHER DEOXYCYTIDYLATE DEAMINASE-RELATED 11 229 IPR015517 -
Amo01g2164 230 PANTHER CYTIDINE/DEOXYCYTIDYLATE DEAMINASE FAMILY PROTEIN 11 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g2164 Amo-Chr1 65844657 65847046 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g2164 K01493 - gmx:100792003 369.392
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo01g2164 01 65844657 65847046 Amo11g1695 11 75471766 75474129 hybridization