Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g1644 ATGGATACTGGAACCTATGGATATCCCAAACAAGGAGTGAAAAAGATTGATCCGTCCTATGATGTTCCAGAAGGAGTGGACATTCGGGGAAGATATGATGAGGAGTTTGCAAAAATCCTCACAAAGGATGCTCTGAAGTTTGTTGCTGAGTTGCAACGTGAGTTCAGGAGCCATATAAGGTATGCTCTGGAGTGCAGAAAAGAGGCAAAGAGGAGGTACAATGAAGGGGCTCTGCCGGGGTTCGATCCGGCGACGAGGTACATAAGGGAAGGAGAGTGGGTGTGTGCACCGGTTCCACCGGCTGTGGCTGATAGGAAGGTAGAGATCACAGGACCTGTGGAGAGGAAGATGGTTATCAATGCTCTCAACTCTGGAGCTAAAGTCTTTATGGCTGATTTTGAAGATGCACTCTCACCAAGCTGGGAGAATCTTATGAGGGGTCAAGTGAACTTGAAGGATGCAGTGGCTGGGACTATAACCTTCAACGACAAAGCCAGGAACAAGGTTTACAAGCTCAACGATCAGACAGCTAAGCTTTTTGTCAGACCAAGAGGTTGGCACCTACCGGAGGCCCATATTTTCATTGATGGTGAACCAGCAACCGGTTGCCTTGTTGATTTCGGTCTCTACTTCTACCACAATCATGCACCGTTCCGCCAGACTCAGGGTGCAGGCTTTGGCCCTTTCTTCTATCTTCCAAAAATGGAGCACTCAAGGGAAGCTAAGATATGGAACAATGTGTTTGAGAGGGCAGAGAAGATGGCAGGCATAGAAAGGGGAAGCATACGGGCCACTGTTCTGATTGAAACACTTCCTGCTGTGTTTCAAATGAACGAAATTCTGTATGAGCTGAGGGACCACTCCGTTGGTCTCAACTGTGGCCGTTGGGATTACATTTTCAGTTATGTCAAGACCTTCCAAGCTCACCCGGATCGGCTGCTCCCGGACAGGGTTCTTGTTGGCATGACTCAGCACTTCATGAAGAGCTACTCTGATCTTCTCATCCGGACGTGTCATAGGCGTGGCGTGCATGCTATGGGAGGCATGGCAGCTCAAATTCCAATTAGAGATGATCCAGCTGCTAATGAGGCAGCACTGGAACTGGTAAGGAAGGACAAACTAAGAGAAGTAAAGGCAGGGCATGACGGAACATGGGCAGCACACCCCGGTCTGATCCCAACCTGCATGGAGGTTTTTAACAACAACATGGGCAATGCTCCTAATCAGATCAAGGACGCGAAGCGCGATGATGCTGCAAGCATAACTGAAGAAGACCTCTTGCAAATACCTAGAGGTGTACGTACAATTGATGGTCTCCGCTTGAATACACGTGTCGGTATTCAGTATGTGGCGGCATGGCTCACGGGATCTGGTTCAGTTCCTCTTTACAACCTCATGGAAGATGCTGCCACTGCTGAGATTAGCAGGGTGCAGAACTGGCAGTGGATTAAGTATGGAGTGGAGTTGAATGGGGATGGACTCGGAGTAAGAGTGAGCAAGGAGCTCTTCAGCCGGGTGGTTGAGGAAGAGATGGCTAGGATTGAAAGTGAGGTGGGAAAAGATAAATTCAAGAAGGGAATGTATAAGGAGGCTTGCAAGATCTTCAAAAGGCAGTGCACTGCTCCAACGCTGGATGATTTTCTGACCCTGGATGCCTACAATTACATAGTCATACATCACCCCAAGGGACCAGCAAAGCTTTGA 1704 0.4871 MDTGTYGYPKQGVKKIDPSYDVPEGVDIRGRYDEEFAKILTKDALKFVAELQREFRSHIRYALECRKEAKRRYNEGALPGFDPATRYIREGEWVCAPVPPAVADRKVEITGPVERKMVINALNSGAKVFMADFEDALSPSWENLMRGQVNLKDAVAGTITFNDKARNKVYKLNDQTAKLFVRPRGWHLPEAHIFIDGEPATGCLVDFGLYFYHNHAPFRQTQGAGFGPFFYLPKMEHSREAKIWNNVFERAEKMAGIERGSIRATVLIETLPAVFQMNEILYELRDHSVGLNCGRWDYIFSYVKTFQAHPDRLLPDRVLVGMTQHFMKSYSDLLIRTCHRRGVHAMGGMAAQIPIRDDPAANEAALELVRKDKLREVKAGHDGTWAAHPGLIPTCMEVFNNNMGNAPNQIKDAKRDDAASITEEDLLQIPRGVRTIDGLRLNTRVGIQYVAAWLTGSGSVPLYNLMEDAATAEISRVQNWQWIKYGVELNGDGLGVRVSKELFSRVVEEEMARIESEVGKDKFKKGMYKEACKIFKRQCTAPTLDDFLTLDAYNYIVIHHPKGPAKL* 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g1644 567 PANTHER MALATE SYNTHASE 19 567 IPR006252 GO:0004474|GO:0006097
Amo11g1644 567 PANTHER MALATE SYNTHASE 19 567 - -
Amo11g1644 567 Gene3D Malate synthase, domain 3 22 432 IPR046363 -
Amo11g1644 567 TIGRFAM malate_syn_A: malate synthase A 39 556 IPR006252 GO:0004474|GO:0006097
Amo11g1644 567 Gene3D Malate synthase, domain III 433 557 IPR044856 -
Amo11g1644 567 Pfam Malate synthase 27 557 IPR001465 GO:0004474|GO:0006097
Amo11g1644 567 ProSitePatterns Malate synthase signature. 285 300 IPR019830 GO:0004474|GO:0006097
Amo11g1644 567 SUPERFAMILY Malate synthase G 22 558 IPR011076 GO:0003824
Amo11g1644 567 PIRSF Malate_synth 18 558 IPR006252 GO:0004474|GO:0006097
Amo11g1644 567 CDD malate_synt_A 39 557 IPR006252 GO:0004474|GO:0006097
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g1644 Amo-Chr11 70951631 70955107 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g1644 K01638 - gmx:732628 1054.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g1644 11 70951631 70955107 Amo11g1644 11 70951631 70955107 ECH
Amo01g2096 01 61893248 61896276 Amo11g1644 11 70951631 70955107 hybridization