Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g1382 ATGAGGACGGTAACATTGCAATCTCCGCCATACGCGGCTCTCTCAATTCCCCCAGCACCTTCTTCTTCTTCTTCCTTCTCCTTCCGTAATTCCACTCTTTTCTTCAACACTTGCCTCCCTCAGTTTCGCGCTTCATCTTCAGCTTCAACTCGCTTCGCTCTCGATGCTTCATCTATCCAAACCGCTTCCACCACTGAATTGGACGCGGTTTCAGCCTTTAGCGAGATCGTTCCCGACACCGTCATCTTCGATGACTTCGAAAAGTTTCCTCCAACAGCAGCTACCGTTAGTTCCTCGCTTCTCTTGGGAATATGTGGTCTTCCAGATACTATTTTCAGGAATGCTGTGGACATGGCTTTGGCTGATTCCGAGTGTTATGGGCTTGAAAACACTGAAGCTAGATTGTCTTGTTTCTCCAGCAAGGCTTTGGTGAATGTCGGAGGTGACATGGCGAAGTTGGTCCCTGGTCGTGTTTCGACCGAAGTGGATGCACGGCTTGCTTATGACACACATGCCATTATTAGAAAGGTGCATGACCTGTTGAAGTTGTACAATGATATTAGTATCCCTCCTCAGCGTCTTCTGTTTAAAATTCCTTCAACTTGGCAGGGAATAGAGGCTGCAAGATTGTTGGAGTCCGAGGGCATACAAACCCACTTGACTTTTGTTTACAGCTTTGCTCAAGCCGCTGCTGCTGCTCAAGCTGGTGCTTCTGTGATTCAAATTTTTGTTGGCCGCTTAAGGGACTGGGCGCGCAATCATTTGGATGACCCAGAGATAGAATCAGCTCAGCTGAAAGGAGAGGATCCTGGGTTGGCATTGGTGACAAAAGCTTACAATTATATTCACAAGTATGGGCATAAGTCAAAGTTGATGGCAGCTGCAGTTCGCAACAAGCAGGATCTATTTAGTCTTCTGGGGGTTGACTATATCATAGCTCCATTGAAGATCTTGCAGTCTCTCAAAGAATCTATTGCTTCTCCTGATGAGAAGTACTCTTTTGTTAGGAAGTTATCGCCTCAGTCTGCTGCCAGCTATGTGTTTAGAGATGAAGAGCTTGTTAAATGGGACCAAGCTAGCCTTGCAGCAGCCATGGGGCCAGCAGCTGTGCAGCTTCTGGCTACTGGACTAGATGGTCATGCCGATCAAGCAAAGCGAGTTGAAGAGTTATTGGGGAAAATTTGGCCACCCCCAAATGTATGA 1203 0.4713 MRTVTLQSPPYAALSIPPAPSSSSSFSFRNSTLFFNTCLPQFRASSSASTRFALDASSIQTASTTELDAVSAFSEIVPDTVIFDDFEKFPPTAATVSSSLLLGICGLPDTIFRNAVDMALADSECYGLENTEARLSCFSSKALVNVGGDMAKLVPGRVSTEVDARLAYDTHAIIRKVHDLLKLYNDISIPPQRLLFKIPSTWQGIEAARLLESEGIQTHLTFVYSFAQAAAAAQAGASVIQIFVGRLRDWARNHLDDPEIESAQLKGEDPGLALVTKAYNYIHKYGHKSKLMAAAVRNKQDLFSLLGVDYIIAPLKILQSLKESIASPDEKYSFVRKLSPQSAASYVFRDEELVKWDQASLAAAMGPAAVQLLATGLDGHADQAKRVEELLGKIWPPPNV* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g1382 400 CDD Transaldolase_TalAB 65 391 IPR004730 GO:0004801|GO:0005737|GO:0006098
Amo11g1382 400 PANTHER TRANSALDOLASE 4 400 IPR001585 GO:0005975
Amo11g1382 400 PANTHER ALDOLASE SUPERFAMILY PROTEIN 4 400 - -
Amo11g1382 400 SUPERFAMILY Aldolase 65 395 - -
Amo11g1382 400 Pfam Transaldolase/Fructose-6-phosphate aldolase 111 385 IPR001585 GO:0005975
Amo11g1382 400 Gene3D Aldolase class I 64 394 IPR013785 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g1382 Amo-Chr11 49513264 49517486 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g1382 K00616 - gmx:100789900 614.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g1382 11 49513264 49517486 Amo11g1382 11 49513264 49517486 ECH
Amo01g1796 01 45673492 45677928 Amo11g1382 11 49513264 49517486 hybridization