Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g1796 ATGAGGACGGTAACATTGCAATCTCCGCCATACGCGGCTCTCTCAATTCCCCCAGCACCTTCTTCTTCTTCCTTCTCCTTCCGTAATTCCACTCTTTTCTTCAACACTTGGCTCCCTCAGTTTCGCGCTTCATCTTCAGCTTCAACTCGCTTCGCTCTCGATGCTTCATCTATCCAAACCGCTTCCACCACTGAATTGGACGCTGTTTCAGCCTTTAGCGAGATCGTTCCCGACACCGTCATCTTCGATGACTTCGAAAAGTTTCCTCCAACAGCAGCTACCGTTAGTTCCTCGCTTCTCTTGGGAATATGTGGTCTTCCAGATACTATTTTCAGGAATGCTGTGGACATGGCTTTGGCTGATTCTGAGTGTTATGGGCTTGAAAACACTGAAGCTAGATTGTCTTGTTTCTCCAGCAAGGCTTTGGTGAATGTCGGAGGTGACATGGCGAAGTTGGTCCCTGGTCGTGTTTCGACCGAAGTGGATGCACGTCTTGCTTATGACACACATGCCATTATTAGAAAGGTGCATGACCTGTTGAAGTTGTACAATGATATTAGTATCCCTCCTCAGCGTCTTCTGTTTAAAATTCCTTCAACCTGGCAGGGAATAGAGGCTGCAAGATTGTTGGAGTCCGAGGGCATACAAACCCACTTGACTTTTGTTTACAGCTTTGCTCAAGCCGCTGCTGCTGCTCAAGCTGGTGCTTCTGTGATTCAAATTTTTGTTGGCCGCTTAAGGGACTGGGCGCGCAATCATTCGGATGACCCAGAGATAGAATCAGCTCAGCTGAAAGGAGAGGATCCTGGGTTGGCATTGGTGACAAAAGCTTACAATTATATTCACAAGTATGGGCATAAGTCAAAGTTGATGGCAGCTGCAGTTCGCAACAAGCAGGATCTATTTAGTCTTCTGGGGGTTGACTATATCATAGCTCCATTGAAGATCTTGCAGTCTCTCAAAGAATCTATTGCTTCTCCTGATGAGAAGTACTCTTTTGTTAGGAAGTTATCGCCTCAGTCTGCTGCCAGCTATGTGTTTAGAGATGAAGAGCTTGTTAAATGGGACCAAGCTAGCCTTGCAGCAGCCATGGGGCCAGCAGCTGTGCAGCTTCTGGCTACTGGACTAGATGGTCATGCCGATCARGCAAAGCGAGTTGAAGAGTTATTWGGGAAAATTTGGCCACCCCCAAATGTATGA 1200 0.47 MRTVTLQSPPYAALSIPPAPSSSSFSFRNSTLFFNTWLPQFRASSSASTRFALDASSIQTASTTELDAVSAFSEIVPDTVIFDDFEKFPPTAATVSSSLLLGICGLPDTIFRNAVDMALADSECYGLENTEARLSCFSSKALVNVGGDMAKLVPGRVSTEVDARLAYDTHAIIRKVHDLLKLYNDISIPPQRLLFKIPSTWQGIEAARLLESEGIQTHLTFVYSFAQAAAAAQAGASVIQIFVGRLRDWARNHSDDPEIESAQLKGEDPGLALVTKAYNYIHKYGHKSKLMAAAVRNKQDLFSLLGVDYIIAPLKILQSLKESIASPDEKYSFVRKLSPQSAASYVFRDEELVKWDQASLAAAMGPAAVQLLATGLDGHADQAKRVEELXGKIWPPPNV* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g1796 399 Gene3D Aldolase class I 63 392 IPR013785 -
Amo01g1796 399 CDD Transaldolase_TalAB 64 389 IPR004730 GO:0004801|GO:0005737|GO:0006098
Amo01g1796 399 Pfam Transaldolase/Fructose-6-phosphate aldolase 110 378 IPR001585 GO:0005975
Amo01g1796 399 SUPERFAMILY Aldolase 64 394 - -
Amo01g1796 399 PANTHER TRANSALDOLASE 4 399 IPR001585 GO:0005975
Amo01g1796 399 PANTHER ALDOLASE SUPERFAMILY PROTEIN 4 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g1796 Amo-Chr1 45673492 45677928 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g1796 K00616 - gmx:100789900 616.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo01g1796 01 45673492 45677928 Amo11g1382 11 49513264 49517486 hybridization