Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g1320 ATGAAGATCTCTTTCATCACTGCATTTTCTCAATTCCCGATTTTCTTTTTCCCCTCTTCCTCTAAATCTCGTTTTCGATCTTTCCTATTTTACAATCATAACTCCAAACCTTCTAGAACCTTTCGCAACCTCAATCAGTTGGAGATGAGCAACGGGGAGCTTTTTAGCATCGAACCTCTCGAGCTCAGGTTCCCCTTTGAGTTGAAGAAGCAGATCTCGTGCGCTCTCCAATTGTTCAATAAGACCGATAGCTATGTAGCTTTCAAGGTGAAAACAACTAATCCGAAGAAGTATTGTGTTCGTCCAAACACAGGAATTGTCTTGCCACGATCAACATGTGATATCATGGTTGCCATGCAGGCGCAAAAGGAAGCGCCACCTGATATGCAATGCAAGGATAAATTTCTTCTTCAGAGTGTGAAAACTTTTGACGGTGCTTCTACAAAAGATATCAATTCAGAAATGTTCAACAAGGAGGCAGGGCATTTGGTTGAGGAGTGTAAATTGAGAGTGGTGTATGTTTCTCCACCTCAACCACCATCTCCAGTCCCAGAAGGTTCTGAGGAAGGGTCATCGCCTAGAGGTTCTGTTTCAGAAAATGGGAATGTCAGTAGTGTTGACTTCACACAAGCATCAAGAGGATTTACTGAAAGATCCGATACTCAATACAAATATGCAGAGGCAAGGGCTCTTATCACAAGATTGACTGAAGAAAAAAGTAATGCAATTCAACAGAACAACGAGTGCCATCAGGAACCGGATCTTCTGAAGCGTGAAGGCAATAAAAATCGCAGTGGAGTCTCCTTTGTCATTATTGTATTAATTGGCTTGCTTGGCATTATTATGGGGTATCTCATGAGGAAGATCTAA 870 0.4184 MKISFITAFSQFPIFFFPSSSKSRFRSFLFYNHNSKPSRTFRNLNQLEMSNGELFSIEPLELRFPFELKKQISCALQLFNKTDSYVAFKVKTTNPKKYCVRPNTGIVLPRSTCDIMVAMQAQKEAPPDMQCKDKFLLQSVKTFDGASTKDINSEMFNKEAGHLVEECKLRVVYVSPPQPPSPVPEGSEEGSSPRGSVSENGNVSSVDFTQASRGFTERSDTQYKYAEARALITRLTEEKSNAIQQNNECHQEPDLLKREGNKNRSGVSFVIIVLIGLLGIIMGYLMRKI* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g1320 289 MobiDBLite consensus disorder prediction 175 211 - -
Amo11g1320 289 Gene3D Immunoglobulins 48 178 IPR013783 -
Amo11g1320 289 ProSiteProfiles Major sperm protein (MSP) domain profile. 54 174 IPR000535 -
Amo11g1320 289 Pfam MSP (Major sperm protein) domain 56 158 IPR000535 -
Amo11g1320 289 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 49 286 IPR016763 GO:0005789
Amo11g1320 289 PANTHER VESICLE-ASSOCIATED PROTEIN 1-2-LIKE 49 286 - -
Amo11g1320 289 Coils Coil 225 252 - -
Amo11g1320 289 SUPERFAMILY PapD-like 45 189 IPR008962 -
Amo11g1320 289 PIRSF VAMP_assoc_prot 47 288 IPR016763 GO:0005789
Amo11g1320 289 MobiDBLite consensus disorder prediction 191 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g1320 Amo-Chr11 45872392 45880631 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g1320 - - gmx:100527687 333.183
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g1320 11 45872392 45880631 Amo11g1320 11 45872392 45880631 ECH
Amo11g1320 11 45872392 45880631 Amo05g0417 05 4813208 4817129 PCT