Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g0564 ATACTTGGCTTTTTGGCCAGAAAATTCTCTTTTTTGCAATTGCAAGAACAAGATCTCTCTATTCCAGTATTCCTTGATACACTTATATTCATACCAGTCAGCCAGGCAACCATAGAAGCTTCTAGGGAGAAGAGAGAGGAAGATATGGGTTGCAGGAACAGGGCGGAGTCGTTCGAAGAGGATCATAGCGGAGCATCGTCACTAAGCGAGGCGTTACTGTTAACGACGATGTGCATCATAGGCCTCCCCGTCGATGTCCACGTTAAGGATGGCTCCGTCTATTCTGGAATCTTCCACACTGCCTCTGTCGATTCCGATTACGGTATCGTTTTGAAGAAGGCAAGGATGACCAAGAAGGGAAAGGGAAAGACCAATGTGGGAAAGGAGGATTTGGTAGATACACTGGTAGTTCTATCTCGTGATTTGGTGCAAGTTGTTGCTAAGGAAGTAATGCTTCCTACCAAGAGTTTTGGTGGAAATATAACTAGTGATGATGGCGAAACAGTTATGCACGATATGTGTTCTCGTGAGAGTCCAACATGTGAGGTAGAGAATCATATGAAGTCTTTGACGGATGTAAAGCATGTTAATCAATCAAGGACTCCAGTCCAAAATGAGAATGGATTTACCCATTGTCTTCCACCTTCAACTGCTGCCATTGATTTTGAAAGAAATAAGTTGCCTGTTAATCAGATGAGAACTTCCACAGAAGTTGATTGCGGGAAAACTGATAAAACAAATATTGGAGAGATTGAAGCATATTCTGGTTCCTCAATCAACTGTAGACAGGCTGGAGATGACAATTCAAAAAGGAATGCTGATGACTTCAGAGAGAAGCCTGAGTTTGTTCAAGGAAAACTTGATGAGAAGAATCAAGTCATCAAATCAACTCATGAAACTAATACTCATCTTGTCCAAGTAGAAGCTGTTGAGAATAGAAGCTATATGGCATCAAATGCTTCTGATAATGGGTTTTATAGAACTAACGGTAATGCATCTGTTAAAGCTGATGATCGGTGTAGTGAAAGGTCTACTACAGCAAATTCTGCTCCTATGAGTTCTGCCCAAGGCATAGATCTCATTTTAGAGTCACACAATATGCCAGAAAAATCTGTTGAGATATCTGCTCCAAAGGGTACAGATTCTACCAGAAATACTAAGGAATTTAAGCTCAACCCAGCGGCCAAAATTTTCTCTCCATCTTTTGTAAATCCTATTTCAACAACTGCTTCCATGCCTATTTCTGCAAACATGGTTTATGTACCAAATAGTTCTCCTGTGGTACATACTGCTGCTGTTCAACCTGAAACCGGTCTCAGTACTTTTGCTTCACTGCCTTCCATGCCTGTTAAGGTTGCACAGTATAGTAACTTGACAATAGGAAATGGTGGAAGTGGTTCTCAATTTTCACCTCCTATTGTTGGACAACTTGCTCATAACAGAGCACAACCTCTACGCTATGGTGCACATTACCCTCCCGTTTTGTCTGAACATGCTTATTTGCAACCCAGCTCCCCTGCTGTTATGGTTGGACGTTCCGGGCAGTTAGTCTATGTTCATTCAGTTTCCCATGATTTGGTTCATGGTGGAACAGCTATCTCCTCAATTTCAGCTCGTCCTATGTTGAATCATGTACAATATCCAAAGCAGCAAGGAGCCTCAGTTGGTCAGCCAATACCAATTTGTGTACCCCCGCCAATCCTAACGAATGCGCCGCAACCCTTTGCTCTTCAAAGCCACATTCCGCTTCTGCAACCTGGGTTTCCTGTAACTCGACCTGTTTCAGTACCCGGGCCAAATGGTTACTATGGAGCTAAATTTTCATGA 1827 0.4253 ILGFLARKFSFLQLQEQDLSIPVFLDTLIFIPVSQATIEASREKREEDMGCRNRAESFEEDHSGASSLSEALLLTTMCIIGLPVDVHVKDGSVYSGIFHTASVDSDYGIVLKKARMTKKGKGKTNVGKEDLVDTLVVLSRDLVQVVAKEVMLPTKSFGGNITSDDGETVMHDMCSRESPTCEVENHMKSLTDVKHVNQSRTPVQNENGFTHCLPPSTAAIDFERNKLPVNQMRTSTEVDCGKTDKTNIGEIEAYSGSSINCRQAGDDNSKRNADDFREKPEFVQGKLDEKNQVIKSTHETNTHLVQVEAVENRSYMASNASDNGFYRTNGNASVKADDRCSERSTTANSAPMSSAQGIDLILESHNMPEKSVEISAPKGTDSTRNTKEFKLNPAAKIFSPSFVNPISTTASMPISANMVYVPNSSPVVHTAAVQPETGLSTFASLPSMPVKVAQYSNLTIGNGGSGSQFSPPIVGQLAHNRAQPLRYGAHYPPVLSEHAYLQPSSPAVMVGRSGQLVYVHSVSHDLVHGGTAISSISARPMLNHVQYPKQQGASVGQPIPICVPPPILTNAPQPFALQSHIPLLQPGFPVTRPVSVPGPNGYYGAKFS* 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g0564 608 PANTHER POLYADENYLATE-BINDING PROTEIN INTERACTING PROTEIN 49 604 - -
Amo11g0564 608 MobiDBLite consensus disorder prediction 41 62 - -
Amo11g0564 608 PANTHER ATAXIN 2-RELATED 49 604 IPR045117 GO:0003723
Amo11g0564 608 Pfam Ataxin 2 SM domain 70 148 IPR025852 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g0564 Amo-Chr11 9832355 9839406 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g0564 - - adu:107480281 1090.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g0564 11 9832355 9839406 Amo11g0564 11 9832355 9839406 ECH
Amo11g0564 11 9832355 9839406 Amo01g0168 01 3034758 3041761 hybridization