Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g0536 ATGCGGAGGGTTCTGGGGAAGATTTCTGGGTTACTGAGCAATCGAAATATGGTTGGAGTGGATAAAACTGGAAACAAATACTTCACCAAAATGGAAGAGATTGATGGTATCAGCTGTATCTACCTAATTCTGTTGTCTTGTTTTGGTGTACTAGTGAAAGAGAAAAGATGGGTGGTGTTTAAGGGAGAGGAGGACCCTACCTCAATTCCAGTTGAATGGATATGTTGGCTGAACGGGCAACGCAAAAAAGCTCCAACTCCAGAGGAAATGATGGAATTGGAAGCAAGGCGTGAACGTGTTAGACAAAATGTTGCTCTTCTAAAGAAAGAAGAAGAGGAAAGGAGAGCTAAAGAAGGCAGTACAGGCAAACGTGTCAGCACTGGAAAGGTTGCTGGTCCAGACTTGAAAAGTTTTATCCGGCAAATTCCAGTTGGCTCAGAAGGTAGTGAGGTTGAAGAATCATCTGGTGCAAGGGGTAACTTGAGGAGTACTCAAGAGAACAAAACTGAGAAAGAAAAAGTGGAACCTGAGTCCTCGGAGCCAACAGGATCTGGTGCAACTTTTAGGCCAGGAACCTGGCAACCGCCAACTTGA 594 0.4461 MRRVLGKISGLLSNRNMVGVDKTGNKYFTKMEEIDGISCIYLILLSCFGVLVKEKRWVVFKGEEDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEEERRAKEGSTGKRVSTGKVAGPDLKSFIRQIPVGSEGSEVEESSGARGNLRSTQENKTEKEKVEPESSEPTGSGATFRPGTWQPPT* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g0536 197 MobiDBLite consensus disorder prediction 106 197 - -
Amo11g0536 197 PANTHER NADH DEHYDROGENASE [UBIQUINONE] 1 ALPHA SUBCOMPLEX SUBUNIT 12 2 197 - -
Amo11g0536 197 MobiDBLite consensus disorder prediction 106 122 - -
Amo11g0536 197 Coils Coil 90 110 - -
Amo11g0536 197 MobiDBLite consensus disorder prediction 164 178 - -
Amo11g0536 197 Pfam NADH ubiquinone oxidoreductase subunit NDUFA12 16 105 IPR007763 GO:0016020|GO:0032981
Amo11g0536 197 PANTHER NADH-UBIQUINONE OXIDOREDUCTASE SUBUNIT B17.2 2 197 IPR007763 GO:0016020|GO:0032981
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g0536 Amo-Chr11 9384780 9392922 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g0536 K18160 - gmx:100789832 284.648
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g0536 11 9384780 9392922 Amo11g0536 11 9384780 9392922 ECH
Amo11g0536 11 9384780 9392922 Amo01g0181 01 3175308 3183501 hybridization