Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g0181 ATGCGGAGGGTTCTGGGGAAGATTTCTGGGTTACTGAGCAATCGAAATATGGTTGGAGTGGATAAAACTGGAAACAAATACTTCACCAAAATGGAAGAGGTTGATGGTATCATGAAAGAGAAAAGATGGGTGGTGTTTAAGGGAGAGGAGGACCCTACCTCAATTCCAGTTGAATGGATATGTTGGCTGAACGGGCAACGCAAAAAAGCTCCAACTCCAGAGGAAATGATGGAATTGGAAGCAAGGCGTGAACGTGTTAGACAAAATGTTGCTCTTCTAAAGAAAGAAGAAGAGGAAAGGAGAGCCAAAGAAGGCAGTACAGGCAAACGTGTCAGCACTGGAAAGGTTGCTGGTCCAGACTTGAAAAGTTTTATCCGGCAAATCCCAGTTGGCTCAGAAGGTAGTGAGGTTGAAGAATCATCTGTTGCAAGGGGTAGCTTGAGGAGTACTCAAGAGAACAAAACTGAGAAAGAAAAAGTGGAACCTGAGTCCTCGGAGCCAACAGGATCTGGTGCAACTTTTAGGCCAGGAACCTGGCAACCGCCAACTTGA 552 0.4565 MRRVLGKISGLLSNRNMVGVDKTGNKYFTKMEEVDGIMKEKRWVVFKGEEDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEEERRAKEGSTGKRVSTGKVAGPDLKSFIRQIPVGSEGSEVEESSVARGSLRSTQENKTEKEKVEPESSEPTGSGATFRPGTWQPPT* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g0181 183 MobiDBLite consensus disorder prediction 92 183 - -
Amo01g0181 183 Pfam NADH ubiquinone oxidoreductase subunit NDUFA12 16 91 IPR007763 GO:0016020|GO:0032981
Amo01g0181 183 PANTHER NADH-UBIQUINONE OXIDOREDUCTASE SUBUNIT B17.2 1 182 IPR007763 GO:0016020|GO:0032981
Amo01g0181 183 MobiDBLite consensus disorder prediction 92 108 - -
Amo01g0181 183 Coils Coil 76 96 - -
Amo01g0181 183 PANTHER NADH DEHYDROGENASE [UBIQUINONE] 1 ALPHA SUBCOMPLEX SUBUNIT 12 1 182 - -
Amo01g0181 183 MobiDBLite consensus disorder prediction 150 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g0181 Amo-Chr1 3175308 3183501 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g0181 K18160 - gmx:100789832 292.352
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g0536 11 9384780 9392922 Amo01g0181 01 3175308 3183501 hybridization