Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g0520 ATGGAATCTCATTCGTTGGTGTCGAAAGCGAGAACCGCGTTTCACTCTGCGGCTGCAAAAGCGGAGCGTGTTATCCTGGATTTCAAATCCGATCGAGATTCTGCTGATAAACAATCGGGGAACGATTTGAGGAGGCAGCAGCAGCAGCAGGAGGGACAAGAATCTGTTCATAACGAGAACGATTCCAAGCTTCGCAGCGAATTGAAGAATATAAAGTGGAGACCTCCACATATAGGAATAAAGCAGGATTGGCAAGATAAAATTAACAACCTTCGAAAGGCGAGGAAAGAAGTCGAAGATACAGACAAAGTTGGAGATACAAACATGGCTTGTGTTCCATTTTATGATGAAAATCTGTACCTCCTAAATATGAAACAATATCAGGAAGCCAAGGCTTCTGAAGCAATTCCAACAGTTGAAGGCTTAACTGTTACAGCAAAGGAACCCATTCCTCCATCATCTGTCCTGAAGCAATTGGCTATAGCAGTTGAGGCCGGAAGGAAAACGAACTCGATGAAAGATTTTCTAGCTTCATCAACAAGTTCTTCACCTGCCAGAGAGAAGGCAGGCATAAGTTTCTCTGCTGTTAAGGCTTTAGTGATGCGCGAAAAGGAAGACAAACTTACCTCTGAGTTTAGCAGCGATGAGAAAGTTGTGCATTTGATTAAGTCTCTGTTTGATCCAGAGGGAGGGTTCCTTAGCAGGAAAATCAACATCAATCCCGAGGAAACTGCTATAACATCTTTACTAAGAGATATTCATGGTGCTCCTCCTGAAAGCCTAGTTGTTAAGTTGGCGGAAGTTATTGGAAACTTTAAGACCCTCCGAAAAATGGCTCTTTTTTGGTGCAGAGTTGTTGCCGAACTGAAGAAACATTGGTCTGAAGAAAAATATTTACCCGGAGTTCCTCTAGATGACATTCCAGATTTAAACTCATGTCTTCTATATCAGCAATTTCAAGTAATCAATTGTTGCATCTCTCGGAAAATGCGCTATATTATTGCCACCGAATCCCTGGAGTCTATGATGAAAGAGGCCAATTCAAATATTGGAAGATCTGACAAATATACTGACAGAGCTCCTGCGAAGCCTTTATTATATGCTAAATTAAGTACTGGGGAGCTTGTTCTTCGACTTGGTGCTCATTGCCCATCTGGAGATCTGACAATGCTAGAAACTGGCGAGCCTGTGTACTCTCCTATCACCCAGGAAGGACCCTTGCTTACAGAAGATCTGATCAAAGAAACTGAGGAGTTTGTGCTGCGGACAGGGAGTGTTGGTGCTGGTTGCTCTCAACTTCTCTCTGATATGCAAGCTTTCAAGGCTGCAAATCCTGGTTGTATTCTGGAAGATTTTGTAAGATGGCACTCTCCTCCTGATTGGACAGAAAGTGAGGCAAGTGTCGAGGATAGTGATTTTTTTGAGGGCTGCGAGTCGTCTTCTAGAGGACAGCTAAGTCGGCGAATGCAGAAAGAAGGAAATTTGTGGCGTGAATTGTGGGAAACATCTAAGCCAGTACCAGCCATTAAACAGGCACCTCTCTTTGATGAGGATTTGGCAGTGGAGGGCATACTCGATATATATGAGGATATCCCGCCTTTTGAGCTCTTTGGACAACTGTTTGTTTCATTATTTGGTTTAGGGCTTGCAATAGCAGAAACTATGCTGACTGATAACAGTGACTTTTCAAAGATGTTCAATGACTGCAAGGATTATGCGGTTAGCACTTGTCAAAGCAACAGATGGAGTGAGAAAGTTGATGAACTTGTTCAGGTGTATGAAACAGTGGAGATGATGTTAGTGAATCCAGAGGAAGCACTAAAGATGACAAAACAGACAGAGGATTCAGTTCTGAGCACTGGTGAACTTAAGAACCGGTTTAAGAAGCTTAGCCATGTCTTTGGTGGGAAAGATAAACCAAAAGATCAGGTAAACACTGAGGAAAAGCCAATTCGACAAGCTTTTTCGAATTTCTTCGACAGCAAGTCATCTTTATTTTCAAAGAAGCCCCCAAAACCAGCAAGCCTATCACCTTCCCAGAAATCTTCCTCTCTAGAAAGTGATTGGACATTGGTTTAG 2079 0.4271 MESHSLVSKARTAFHSAAAKAERVILDFKSDRDSADKQSGNDLRRQQQQQEGQESVHNENDSKLRSELKNIKWRPPHIGIKQDWQDKINNLRKARKEVEDTDKVGDTNMACVPFYDENLYLLNMKQYQEAKASEAIPTVEGLTVTAKEPIPPSSVLKQLAIAVEAGRKTNSMKDFLASSTSSSPAREKAGISFSAVKALVMREKEDKLTSEFSSDEKVVHLIKSLFDPEGGFLSRKININPEETAITSLLRDIHGAPPESLVVKLAEVIGNFKTLRKMALFWCRVVAELKKHWSEEKYLPGVPLDDIPDLNSCLLYQQFQVINCCISRKMRYIIATESLESMMKEANSNIGRSDKYTDRAPAKPLLYAKLSTGELVLRLGAHCPSGDLTMLETGEPVYSPITQEGPLLTEDLIKETEEFVLRTGSVGAGCSQLLSDMQAFKAANPGCILEDFVRWHSPPDWTESEASVEDSDFFEGCESSSRGQLSRRMQKEGNLWRELWETSKPVPAIKQAPLFDEDLAVEGILDIYEDIPPFELFGQLFVSLFGLGLAIAETMLTDNSDFSKMFNDCKDYAVSTCQSNRWSEKVDELVQVYETVEMMLVNPEEALKMTKQTEDSVLSTGELKNRFKKLSHVFGGKDKPKDQVNTEEKPIRQAFSNFFDSKSSLFSKKPPKPASLSPSQKSSSLESDWTLV* 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g0520 692 MobiDBLite consensus disorder prediction 28 70 - -
Amo11g0520 692 Coils Coil 81 101 - -
Amo11g0520 692 MobiDBLite consensus disorder prediction 662 692 - -
Amo11g0520 692 PANTHER RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT 3 691 IPR045700 GO:0005096|GO:0043547
Amo11g0520 692 MobiDBLite consensus disorder prediction 41 55 - -
Amo11g0520 692 PANTHER RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT 3 691 - -
Amo11g0520 692 Pfam Rab3 GTPase-activating protein catalytic subunit 378 528 IPR026147 -
Amo11g0520 692 MobiDBLite consensus disorder prediction 56 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g0520 Amo-Chr11 9045420 9053779 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g0520 K18270 - gmx:100818643 963.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g0520 11 9045420 9053779 Amo11g0520 11 9045420 9053779 ECH
Amo11g0520 11 9045420 9053779 Amo01g0197 01 3314824 3322807 hybridization